RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 PGK1P00558 417 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 FGRP09769 529 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 ZNF865P0CJ78 1059 aaPredicted RBP16.74■□□□□ 0.27
CALCA-204ENST00000469608 AKR1A1P14550 325 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 ADCYAP1R1P41586 468 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 MDM2Q00987 491 aaPredicted RBP16.74■□□□□ 0.27
CALCA-204ENST00000469608 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 UBE2OQ9C0C9 1292 aaKnown RBP16.74■□□□□ 0.27
CALCA-204ENST00000469608 ACAD9Q9H845 621 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 RNF146Q9NTX7 359 aa16.74■□□□□ 0.27
CALCA-204ENST00000469608 LCTP09848 1927 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 SOX1O00570 391 aaPredicted RBP16.73■□□□□ 0.27
CALCA-204ENST00000469608 FDX1P10109 184 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 TOP1P11387 765 aaKnown RBP16.73■□□□□ 0.27
CALCA-204ENST00000469608 ALAS1P13196 640 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 BMP8BP34820 402 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 MSL3Q8N5Y2 521 aaKnown RBP16.73■□□□□ 0.27
CALCA-204ENST00000469608 DCAF4Q8WV16 495 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 FGD4Q96M96 766 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 PRR12Q9ULL5 1215 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 LRRC37A2A6NM11 1700 aa16.73■□□□□ 0.27
CALCA-204ENST00000469608 ZNF536O15090 1300 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 NEDD4P46934 1319 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 FRMPD2Q68DX3 1309 aaPredicted RBP16.72■□□□□ 0.27
CALCA-204ENST00000469608 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
CALCA-204ENST00000469608 SLC16A2P36021 539 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 NOVP48745 357 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 TRIM60Q495X7 471 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 SLC39A5Q6ZMH5 540 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.72■□□□□ 0.27
CALCA-204ENST00000469608 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
CALCA-204ENST00000469608 RNF180Q86T96 592 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 A1CFQ9NQ94 594 aaKnown RBP16.72■□□□□ 0.27
CALCA-204ENST00000469608 PRDM5Q9NQX1 630 aaPredicted RBP16.72■□□□□ 0.27
CALCA-204ENST00000469608 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.72■□□□□ 0.27
CALCA-204ENST00000469608 PRKAG2Q9UGJ0 569 aa16.72■□□□□ 0.27
CALCA-204ENST00000469608 SYNRGQ9UMZ2 1314 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 POTEB2H3BUK9 544 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 PLA2G6O60733 806 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 CNTN2Q02246 1040 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 MAMDC4Q6UXC1 1216 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 ARMCX2Q7L311 632 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 TRERF1Q96PN7 1200 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.27
CALCA-204ENST00000469608 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
CALCA-204ENST00000469608 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 FAM184BQ9ULE4 1060 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 CCPG1Q9ULG6 757 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 PHF24Q9UPV7 400 aa16.71■□□□□ 0.27
CALCA-204ENST00000469608 HIP1O00291 1037 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 TKFCQ3LXA3 575 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 MUM1L1Q5H9M0 696 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 SYDE2Q5VT97 1194 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 TDHQ8IZJ6 230 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 ZKSCAN3Q9BRR0 538 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
CALCA-204ENST00000469608 ZNF213O14771 459 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 ADAMTS4O75173 837 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
CALCA-204ENST00000469608 PDE4AP27815 886 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 ESR2Q92731 530 aa16.69■□□□□ 0.26
CALCA-204ENST00000469608 A0A1W2PQ45 241 aaPredicted RBP16.68■□□□□ 0.26
CALCA-204ENST00000469608 A0A1W2PQY0 241 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 MYADML2A6NDP7 307 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 ADCY6O43306 1168 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 PDHBP11177 359 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 SNX17Q15036 470 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 CCDC144BQ3MJ40 725 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 NSMFQ6X4W1 530 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
CALCA-204ENST00000469608 ABHD16BQ9H3Z7 469 aa16.68■□□□□ 0.26
CALCA-204ENST00000469608 DDX49Q9Y6V7 483 aaKnown RBP16.68■□□□□ 0.26
CALCA-204ENST00000469608 MYH6P13533 1939 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 SOWAHBA6NEL2 793 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 KDM4AO75164 1064 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 ICAM1P05362 532 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 C6orf222P0C671 652 aaPredicted RBP16.67■□□□□ 0.26
CALCA-204ENST00000469608 GSPT1P15170 499 aaKnown RBP16.67■□□□□ 0.26
CALCA-204ENST00000469608 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
CALCA-204ENST00000469608 TTC22Q5TAA0 569 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 BTNL9Q6UXG8 535 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 PDLIM7Q9NR12 457 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 CYP39A1Q9NYL5 469 aa16.67■□□□□ 0.26
CALCA-204ENST00000469608 B4E1Z4 1266 aa16.66■□□□□ 0.26
CALCA-204ENST00000469608 PQBP1O60828 265 aaKnown RBP16.66■□□□□ 0.26
CALCA-204ENST00000469608 DUSP11O75319 330 aaKnown RBP16.66■□□□□ 0.26
CALCA-204ENST00000469608 ACLYP53396 1101 aa16.66■□□□□ 0.26
CALCA-204ENST00000469608 TLE2Q04725 743 aa16.66■□□□□ 0.26
CALCA-204ENST00000469608 ZNF543Q08ER8 600 aa16.66■□□□□ 0.26
CALCA-204ENST00000469608 IMMTQ16891 758 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms