RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 MROH7Q68CQ1 1323 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 FOXP2O15409 715 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-204ENST00000469504 ACVR2BQ13705 512 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 PCSK9Q8NBP7 692 aaKnown RBP12.97□□□□□ -0.33
COL4A3-204ENST00000469504 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 DCAF4Q8WV16 495 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
COL4A3-204ENST00000469504 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-204ENST00000469504 MYH4Q9Y623 1939 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 ELP1O95163 1332 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 SYNRGQ9UMZ2 1314 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 A0A1W2PQ45 241 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 A0A1W2PQY0 241 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 ASB14A6NK59 587 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 PGK1P00558 417 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 CLTBP09497 229 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 TAL1P17542 331 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 MCCP23508 829 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 CCDC129Q6ZRS4 1044 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 DEFB123Q8N688 67 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 PRDM5Q9NQX1 630 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 IL17RBQ9NRM6 502 aa12.96□□□□□ -0.33
COL4A3-204ENST00000469504 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
COL4A3-204ENST00000469504 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.34
COL4A3-204ENST00000469504 ZNF536O15090 1300 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 FGAP02671 866 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
COL4A3-204ENST00000469504 TOP1P11387 765 aaKnown RBP12.95□□□□□ -0.34
COL4A3-204ENST00000469504 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 ACLYP53396 1101 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 GJA9P57773 515 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 NKX3-2P78367 333 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 CTDSPL2Q05D32 466 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 ARMCX2Q7L311 632 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 FAM133AQ8N9E0 248 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 GLT1D1Q96MS3 346 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 TTC14Q96N46 770 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 UPF3AQ9H1J1 476 aaKnown RBP12.95□□□□□ -0.34
COL4A3-204ENST00000469504 STARD7Q9NQZ5 370 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 STXBP5LQ9Y2K9 1186 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
COL4A3-204ENST00000469504 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 DCDC2CA8MYV0 355 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 HIP1O00291 1037 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 KIAA0355O15063 1070 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 ICAM1P05362 532 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 TLE2Q04725 743 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
COL4A3-204ENST00000469504 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 FGD4Q96M96 766 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
COL4A3-204ENST00000469504 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
COL4A3-204ENST00000469504 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 C6orf222P0C671 652 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-204ENST00000469504 KCNA10Q16322 511 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 CCDC144BQ3MJ40 725 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 MFSD6Q6ZSS7 791 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 KCTD1Q719H9 257 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 CHD1LQ86WJ1 897 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 CCDC144CPQ8IYA2 1237 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 BADQ92934 168 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 FAM227BQ96M60 508 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 LNPKQ9C0E8 428 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 MAF1Q9H063 256 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 KATNBL1Q9H079 304 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 RANBP17Q9H2T7 1088 aaKnown RBP12.93□□□□□ -0.34
COL4A3-204ENST00000469504 HOMER2Q9NSB8 354 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
COL4A3-204ENST00000469504 Q9Y3F1 56 aa12.93□□□□□ -0.34
COL4A3-204ENST00000469504 DNAH12Q6ZR08 3092 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 A0A0U1RQG5 324 aaPredicted RBP12.92□□□□□ -0.34
COL4A3-204ENST00000469504 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 CABYRO75952 493 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 ALAS1P13196 640 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 RAG1P15918 1043 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 SMAD3P84022 425 aaKnown RBP12.92□□□□□ -0.34
COL4A3-204ENST00000469504 NMIQ13287 307 aaPredicted RBP12.92□□□□□ -0.34
COL4A3-204ENST00000469504 CCDC96Q2M329 555 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms