RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 GRIN2DO15399 1336 aa15.39■□□□□ 0.05
HDAC6-217ENST00000469223 MYO7AQ13402 2215 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 GFRA3O60609 400 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 ACTN1P12814 892 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 STAT3P40763 770 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 PLCD1P51178 756 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 PTPN5P54829 565 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 ITGA7Q13683 1181 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 MFSD14AQ96MC6 490 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-217ENST00000469223 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 BAZ2AQ9UIF9 1905 aaKnown RBP15.38■□□□□ 0.05
HDAC6-217ENST00000469223 ASTN1O14525 1302 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 NCOR2Q9Y618 2525 aa15.38■□□□□ 0.05
HDAC6-217ENST00000469223 LCHNA4D1U4 455 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 GRXCR2A6NFK2 248 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 WDR46O15213 610 aaKnown RBP15.37■□□□□ 0.05
HDAC6-217ENST00000469223 CYP2E1P05181 493 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-217ENST00000469223 CYP7A1P22680 504 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 EVX2Q03828 476 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 VCPKMTQ9H867 229 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 LMCD1Q9NZU5 365 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 DMXL1Q9Y485 3027 aa15.37■□□□□ 0.05
HDAC6-217ENST00000469223 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-217ENST00000469223 COPB2P35606 906 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 PSMC6P62333 389 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 ZP2Q05996 745 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 ABHD16BQ9H3Z7 469 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
HDAC6-217ENST00000469223 FAM86C1Q9NVL1 165 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 ADAMTS5Q9UNA0 930 aa15.36■□□□□ 0.05
HDAC6-217ENST00000469223 TPRP12270 2363 aaKnown RBP15.35■□□□□ 0.05
HDAC6-217ENST00000469223 H3BQ06 376 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-217ENST00000469223 VWA5AO00534 786 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 CABYRO75952 493 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 CYP2C9P11712 490 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 ICA1Q05084 483 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 TTC39AQ5SRH9 613 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 REPS2Q8NFH8 660 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 PHOSPHO2Q8TCD6 241 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 FGD4Q96M96 766 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 ARHGEF10LQ9HCE6 1279 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 NLRC5Q86WI3 1866 aa15.35■□□□□ 0.05
HDAC6-217ENST00000469223 DNAJC25-GNG10A0A024R161 153 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 PTGS1P23219 599 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 GABPAQ06546 454 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 IER5LQ5T953 404 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 SNRNP48Q6IEG0 339 aaKnown RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 TMEM179Q6ZVK1 233 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 NOL8Q76FK4 1167 aaKnown RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 ARMCX2Q7L311 632 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 ZNF467Q7Z7K2 595 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 ALDH8A1Q9H2A2 487 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 SH2D4AQ9H788 454 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 TRMT13Q9NUP7 481 aaKnown RBP15.34■□□□□ 0.05
HDAC6-217ENST00000469223 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 SCN10AQ9Y5Y9 1956 aa15.34■□□□□ 0.05
HDAC6-217ENST00000469223 NKX3-2P78367 333 aa15.33■□□□□ 0.04
HDAC6-217ENST00000469223 TCF15Q12870 199 aa15.33■□□□□ 0.04
HDAC6-217ENST00000469223 TMCO2Q7Z6W1 182 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-217ENST00000469223 KATNBL1Q9H079 304 aa15.33■□□□□ 0.04
HDAC6-217ENST00000469223 MUTYHQ9UIF7 546 aa15.33■□□□□ 0.04
HDAC6-217ENST00000469223 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
HDAC6-217ENST00000469223 LCTP09848 1927 aa15.33■□□□□ 0.04
HDAC6-217ENST00000469223 POLR3DP05423 398 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-217ENST00000469223 PUS10Q3MIT2 529 aaKnown RBP15.32■□□□□ 0.04
HDAC6-217ENST00000469223 NEK9Q8TD19 979 aa15.32■□□□□ 0.04
HDAC6-217ENST00000469223 MEIS3Q99687 375 aa15.32■□□□□ 0.04
HDAC6-217ENST00000469223 TEX13BQ9BXU2 312 aa15.32■□□□□ 0.04
HDAC6-217ENST00000469223 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.04
HDAC6-217ENST00000469223 SUGCTQ9HAC7 445 aa15.32■□□□□ 0.04
HDAC6-217ENST00000469223 MYH4Q9Y623 1939 aa15.32■□□□□ 0.04
HDAC6-217ENST00000469223 TNKSO95271 1327 aa15.32■□□□□ 0.04
HDAC6-217ENST00000469223 CHD6Q8TD26 2715 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 IDH1O75874 414 aaKnown RBP15.31■□□□□ 0.04
HDAC6-217ENST00000469223 AKR1B1P15121 316 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 IRS1P35568 1242 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 ZAP70P43403 619 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 KCNJ6P48051 423 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 SLC4A3P48751 1232 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 TNFAIP2Q03169 654 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 CERS3Q8IU89 383 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 MAGEB6Q8N7X4 407 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 SEZ6LQ9BYH1 1024 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 RIPK3Q9Y572 518 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-217ENST00000469223 MICAL3Q7RTP6 2002 aa15.31■□□□□ 0.04
HDAC6-217ENST00000469223 BAHCC1Q9P281 2608 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms