RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CHMP4BQ9H444 224 aaKnown RBP15.63■□□□□ 0.09
PTPN7-207ENST00000468385 ZNF576Q9H609 170 aa15.63■□□□□ 0.09
PTPN7-207ENST00000468385 ECHDC1Q9NTX5 307 aa15.63■□□□□ 0.09
PTPN7-207ENST00000468385 MUC3AQ02505 3323 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 ARVCFO00192 962 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 CTAGE5O15320 804 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 GPAA1O43292 621 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 PRDM1O75626 825 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 OAZ1P54368 228 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 RASIP1Q5U651 963 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 ARMCX2Q7L311 632 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 LRRC47Q8N1G4 583 aaKnown RBP15.62■□□□□ 0.09
PTPN7-207ENST00000468385 CHST13Q8NET6 341 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 TIFAQ96CG3 184 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 SPC25Q9HBM1 224 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 MTMR4Q9NYA4 1195 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 FBXO40Q9UH90 709 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 FEM1BQ9UK73 627 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 SYNPO2Q9UMS6 1093 aa15.62■□□□□ 0.09
PTPN7-207ENST00000468385 CTDP1Q9Y5B0 961 aaPredicted RBP15.62■□□□□ 0.09
PTPN7-207ENST00000468385 MYH4Q9Y623 1939 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 A0A0U1RQG5 324 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-207ENST00000468385 M0R2C6 588 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 RNF113AO15541 343 aaKnown RBP15.61■□□□□ 0.09
PTPN7-207ENST00000468385 CSF2RAP15509 400 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 NKX3-2P78367 333 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 PPIGQ13427 754 aaKnown RBP eCLIP15.61■□□□□ 0.09
PTPN7-207ENST00000468385 FAM126BQ8IXS8 530 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 CCDC144CPQ8IYA2 1237 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 ZNF444Q8N0Y2 327 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-207ENST00000468385 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 SYMPKQ92797 1274 aaKnown RBP15.61■□□□□ 0.09
PTPN7-207ENST00000468385 PBX4Q9BYU1 374 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 PRDM6Q9NQX0 595 aa15.61■□□□□ 0.09
PTPN7-207ENST00000468385 GRXCR1A8MXD5 290 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 TTLL1O95922 423 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 PBX2P40425 430 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 TDO2P48775 406 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 CNTN2Q02246 1040 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 GNASQ5JWF2 1037 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 TSHZ3Q63HK5 1081 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 SLFN13Q68D06 897 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 FAM133AQ8N9E0 248 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 VTI1AQ96AJ9 217 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 PPP1R12CQ9BZL4 782 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 MCM3APO60318 1980 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 PLIN4Q96Q06 1357 aa15.6■□□□□ 0.09
PTPN7-207ENST00000468385 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.59■□□□□ 0.09
PTPN7-207ENST00000468385 CD4P01730 458 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 ZFYP08048 801 aaPredicted RBP15.59■□□□□ 0.09
PTPN7-207ENST00000468385 ACRP10323 421 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 BMP3P12645 472 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 GNAT2P19087 354 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 C20orf194Q5TEA3 1177 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 CCDC174Q6PII3 467 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 ZNF365Q70YC5 407 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 IFNL3Q8IZI9 196 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 TMEM199Q8N511 208 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 NEDD1Q8NHV4 660 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 ZNF287Q9HBT7 754 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 HOMER2Q9NSB8 354 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 ASTN1O14525 1302 aa15.59■□□□□ 0.09
PTPN7-207ENST00000468385 PATL2C9JE40 543 aaKnown RBP15.58■□□□□ 0.08
PTPN7-207ENST00000468385 TMEM232C9JQI7 657 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 TLR3O15455 904 aaKnown RBP15.58■□□□□ 0.08
PTPN7-207ENST00000468385 APPP05067 770 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 FDX1P10109 184 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 BEX3Q00994 111 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 TJAP1Q5JTD0 557 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 PSRC1Q6PGN9 363 aaPredicted RBP15.58■□□□□ 0.08
PTPN7-207ENST00000468385 CCDC129Q6ZRS4 1044 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 SLC43A3Q8NBI5 491 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 ACAD9Q9H845 621 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 A1CFQ9NQ94 594 aaKnown RBP15.58■□□□□ 0.08
PTPN7-207ENST00000468385 GNEQ9Y223 722 aaKnown RBP15.58■□□□□ 0.08
PTPN7-207ENST00000468385 ZNF536O15090 1300 aa15.58■□□□□ 0.08
PTPN7-207ENST00000468385 SOWAHBA6NEL2 793 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 TSPY3P0CV98 308 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 TSPY8P0CW00 308 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 CYP2C18P33260 490 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 STAT2P52630 851 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 TNFAIP2Q03169 654 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 GPATCH3Q96I76 525 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 AGBL1Q96MI9 1066 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 SEC62Q99442 399 aaKnown RBP15.57■□□□□ 0.08
PTPN7-207ENST00000468385 DCTPP1Q9H773 170 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 RNF146Q9NTX7 359 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 RCAN3Q9UKA8 241 aa15.57■□□□□ 0.08
PTPN7-207ENST00000468385 PTGS1P23219 599 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 TFAP4Q01664 338 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 CXCL17Q6UXB2 119 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 STAG1Q8WVM7 1258 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 HERVK_113Q902F9 699 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 GAS2L1Q99501 681 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-207ENST00000468385 PRDM12Q9H4Q4 367 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 IL23AQ9NPF7 189 aa15.56■□□□□ 0.08
PTPN7-207ENST00000468385 CXXC1Q9P0U4 656 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-207ENST00000468385 LRRC37A2A6NM11 1700 aa15.55■□□□□ 0.08
PTPN7-207ENST00000468385 GRIN2DO15399 1336 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms