RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ATP2A1O14983 1001 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 STRNO43815 780 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 ERCC3P19447 782 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 RGS2P41220 211 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 GJA8P48165 433 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
COL4A6-205ENST00000468338 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
COL4A6-205ENST00000468338 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 UNC93B1Q9H1C4 597 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 MROH8Q9H579 483 aa13.17□□□□□ -0.3
COL4A6-205ENST00000468338 SGSM2O43147 1006 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 PLA2G6O60733 806 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 SLC25A27O95847 323 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 MYCP01106 439 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-205ENST00000468338 BMP3P12645 472 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 CAPN2P17655 700 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-205ENST00000468338 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 RUFY2Q8WXA3 655 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 TTC14Q96N46 770 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 APBA2Q99767 749 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 RNF208Q9H0X6 261 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-205ENST00000468338 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 FEM1BQ9UK73 627 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
COL4A6-205ENST00000468338 MKI67P46013 3256 aaKnown RBP13.16□□□□□ -0.3
COL4A6-205ENST00000468338 NEDD4P46934 1319 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 RPTORQ8N122 1335 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 RAD21O60216 631 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 SGPL1O95470 568 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 OATP04181 439 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 STAT3P40763 770 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 TRIM32Q13049 653 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 CCL14Q16627 93 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
COL4A6-205ENST00000468338 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
COL4A6-205ENST00000468338 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
COL4A6-205ENST00000468338 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
COL4A6-205ENST00000468338 FDX1P10109 184 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
COL4A6-205ENST00000468338 MCCP23508 829 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 COPB2P35606 906 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 SLC1A4P43007 532 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 OAZ1P54368 228 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 PTH1RQ03431 593 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 U2AF1L4Q8WU68 220 aaKnown RBP13.14□□□□□ -0.31
COL4A6-205ENST00000468338 ESR2Q92731 530 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 ARID3AQ99856 593 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 TEX13BQ9BXU2 312 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 TOMM22Q9NS69 142 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
COL4A6-205ENST00000468338 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
COL4A6-205ENST00000468338 TMEM232C9JQI7 657 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 COBLO75128 1261 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
COL4A6-205ENST00000468338 ADORA2AP29274 412 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 STAT2P52630 851 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 PLS1Q14651 629 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 SKIV2LQ15477 1246 aaKnown RBP13.13□□□□□ -0.31
COL4A6-205ENST00000468338 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
COL4A6-205ENST00000468338 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL4A6-205ENST00000468338 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
COL4A6-205ENST00000468338 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
COL4A6-205ENST00000468338 B4E1Z4 1266 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 ZBED4O75132 1171 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 KDM4AO75164 1064 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 FCER1AP12319 257 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 CACNB2Q08289 660 aaPredicted RBP13.12□□□□□ -0.31
COL4A6-205ENST00000468338 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 DEFB118Q96PH6 123 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
COL4A6-205ENST00000468338 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
COL4A6-205ENST00000468338 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
COL4A6-205ENST00000468338 ZNF536O15090 1300 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms