RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 PLA2G6O60733 806 aa17.06■□□□□ 0.32
RB1-202ENST00000467505 RAG1P15918 1043 aa17.06■□□□□ 0.32
RB1-202ENST00000467505 ACLYP53396 1101 aa17.06■□□□□ 0.32
RB1-202ENST00000467505 ZNF697Q5TEC3 545 aa17.06■□□□□ 0.32
RB1-202ENST00000467505 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
RB1-202ENST00000467505 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
RB1-202ENST00000467505 PQBP1O60828 265 aaKnown RBP17.05■□□□□ 0.32
RB1-202ENST00000467505 CST5P28325 142 aaPredicted RBP17.05■□□□□ 0.32
RB1-202ENST00000467505 AAMPQ13685 434 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 SHHQ15465 462 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 KLHDC9Q8NEP7 349 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 TMEM39AQ9NV64 488 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
RB1-202ENST00000467505 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
RB1-202ENST00000467505 ELP1O95163 1332 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 ASB14A6NK59 587 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 KIAA0355O15063 1070 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
RB1-202ENST00000467505 C6orf222P0C671 652 aaPredicted RBP17.04■□□□□ 0.32
RB1-202ENST00000467505 MCCP23508 829 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 CTDSPL2Q05D32 466 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 HDAC1Q13547 482 aaPredicted RBP17.04■□□□□ 0.32
RB1-202ENST00000467505 ALX1Q15699 326 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 KCNA10Q16322 511 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 ANKRD33Q7Z3H0 272 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
RB1-202ENST00000467505 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
RB1-202ENST00000467505 LENG1Q96BZ8 264 aaPredicted RBP17.04■□□□□ 0.32
RB1-202ENST00000467505 ORC4O43929 436 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 PDE1AP54750 535 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 SMAD3P84022 425 aaKnown RBP17.03■□□□□ 0.32
RB1-202ENST00000467505 CCDC144BQ3MJ40 725 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 TRERF1Q96PN7 1200 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
RB1-202ENST00000467505 ALAS1P13196 640 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 GJA9P57773 515 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 FPGSQ05932 587 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 CCDC96Q2M329 555 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 GNASQ5JWF2 1037 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 CCDC174Q6PII3 467 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 FAM133AQ8N9E0 248 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 UPF3AQ9H1J1 476 aaKnown RBP17.02■□□□□ 0.32
RB1-202ENST00000467505 A1CFQ9NQ94 594 aaKnown RBP17.02■□□□□ 0.32
RB1-202ENST00000467505 PNMA2Q9UL42 364 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 PRR12Q9ULL5 1215 aa17.02■□□□□ 0.32
RB1-202ENST00000467505 ZMYM6O95789 1325 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 COL6A3P12111 3177 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 DLL1O00548 723 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 FOXP2O15409 715 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
RB1-202ENST00000467505 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
RB1-202ENST00000467505 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
RB1-202ENST00000467505 C9orf50Q5SZB4 431 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 CCSAPQ6IQ19 270 aaPredicted RBP17.01■□□□□ 0.31
RB1-202ENST00000467505 NOL8Q76FK4 1167 aaKnown RBP17.01■□□□□ 0.31
RB1-202ENST00000467505 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
RB1-202ENST00000467505 FGD4Q96M96 766 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 AGBL1Q96MI9 1066 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 IL17RBQ9NRM6 502 aa17.01■□□□□ 0.31
RB1-202ENST00000467505 ZNF536O15090 1300 aa17■□□□□ 0.31
RB1-202ENST00000467505 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
RB1-202ENST00000467505 ASGR1P07306 291 aa17■□□□□ 0.31
RB1-202ENST00000467505 FGRP09769 529 aa17■□□□□ 0.31
RB1-202ENST00000467505 CNTN2Q02246 1040 aa17■□□□□ 0.31
RB1-202ENST00000467505 TNFAIP2Q03169 654 aa17■□□□□ 0.31
RB1-202ENST00000467505 FAAP100Q0VG06 881 aa17■□□□□ 0.31
RB1-202ENST00000467505 VPS53Q5VIR6 699 aa17■□□□□ 0.31
RB1-202ENST00000467505 CCPG1Q9ULG6 757 aa17■□□□□ 0.31
RB1-202ENST00000467505 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 ZEB2O60315 1214 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 NMT2O60551 498 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 CABYRO75952 493 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 FGAP02671 866 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 ICAM1P05362 532 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
RB1-202ENST00000467505 NOVP48745 357 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 NKX3-2P78367 333 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 RRP12Q5JTH9 1297 aaKnown RBP16.99■□□□□ 0.31
RB1-202ENST00000467505 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 AP5M1Q9H0R1 490 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 ADD3Q9UEY8 706 aaKnown RBP16.99■□□□□ 0.31
RB1-202ENST00000467505 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 LRRC37A2A6NM11 1700 aa16.99■□□□□ 0.31
RB1-202ENST00000467505 MYADML2A6NDP7 307 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 ARVCFO00192 962 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 TIMP1P01033 207 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms