RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 TRDNQ13061 729 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 RNF180Q86T96 592 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 MMP19Q99542 508 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 ARPP21Q9UBL0 812 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-207ENST00000466588 DIS3Q9Y2L1 958 aaKnown RBP13.03□□□□□ -0.32
GAPDH-207ENST00000466588 CHD9Q3L8U1 2897 aa13.03□□□□□ -0.32
GAPDH-207ENST00000466588 CYP2D7A0A087X1C5 515 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 ADAMTS4O75173 837 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 PGK1P00558 417 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 CYP21A2P08686 494 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 ZNF865P0CJ78 1059 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-207ENST00000466588 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.33
GAPDH-207ENST00000466588 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-207ENST00000466588 CDK8P49336 464 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 KCTD2Q14681 263 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 RABEP1Q15276 862 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-207ENST00000466588 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 REPS2Q8NFH8 660 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 RNPC3Q96LT9 517 aaKnown RBP13.02□□□□□ -0.33
GAPDH-207ENST00000466588 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-207ENST00000466588 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 SNX14Q9Y5W7 946 aa13.02□□□□□ -0.33
GAPDH-207ENST00000466588 VWA5AO00534 786 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 ST18O60284 1047 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 AKR1A1P14550 325 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 FOSL2P15408 326 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 COPB2P35606 906 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 STAT3P40763 770 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 HAND2P61296 217 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 PPARAQ07869 468 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
GAPDH-207ENST00000466588 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-207ENST00000466588 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
GAPDH-207ENST00000466588 RNF41Q9H4P4 317 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-207ENST00000466588 KANSL2Q9H9L4 492 aa13.01□□□□□ -0.33
GAPDH-207ENST00000466588 EPB41L4AQ9HCS5 686 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-207ENST00000466588 USP17L12C9JPN9 530 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 USP17L21D6R901 530 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 PQBP1O60828 265 aaKnown RBP13□□□□□ -0.33
GAPDH-207ENST00000466588 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
GAPDH-207ENST00000466588 RAG1P15918 1043 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 CASTP20810 708 aaKnown RBP13□□□□□ -0.33
GAPDH-207ENST00000466588 FPGSQ05932 587 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 ANKRD33Q7Z3H0 272 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 KCNB2Q92953 911 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 TOX2Q96NM4 488 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 NEK1Q96PY6 1258 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 GOPCQ9HD26 462 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 TOMM22Q9NS69 142 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
GAPDH-207ENST00000466588 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
GAPDH-207ENST00000466588 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 FOXP2O15409 715 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 PDE4BQ07343 736 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 FAAP100Q0VG06 881 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 BECN1Q14457 450 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
GAPDH-207ENST00000466588 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 TSEN34Q9BSV6 310 aaKnown RBP12.99□□□□□ -0.33
GAPDH-207ENST00000466588 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
GAPDH-207ENST00000466588 CNNM2Q9H8M5 875 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 TMEM39AQ9NV64 488 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 CNPY2Q9Y2B0 182 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 MYH8P13535 1937 aa12.99□□□□□ -0.33
GAPDH-207ENST00000466588 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
GAPDH-207ENST00000466588 GREB1LQ9C091 1923 aaPredicted RBP12.98□□□□□ -0.33
GAPDH-207ENST00000466588 SYNGAP1Q96PV0 1343 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 MOXD2PA6NHM9 499 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 E7EWF7 191 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 NEK4P51957 841 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 ACLYP53396 1101 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 FGD1P98174 961 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
GAPDH-207ENST00000466588 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 KRT23Q9C075 422 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 TBX21Q9UL17 535 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
GAPDH-207ENST00000466588 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
GAPDH-207ENST00000466588 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
GAPDH-207ENST00000466588 DNAJB2P25686 324 aa12.97□□□□□ -0.33
GAPDH-207ENST00000466588 GRIN2CQ14957 1233 aa12.97□□□□□ -0.33
GAPDH-207ENST00000466588 RRP12Q5JTH9 1297 aaKnown RBP12.97□□□□□ -0.33
GAPDH-207ENST00000466588 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
GAPDH-207ENST00000466588 SNRNP48Q6IEG0 339 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms