RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 DAGLBQ8NCG7 672 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 COA7Q96BR5 231 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 SLC10A4Q96EP9 437 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
VPS16-206ENST00000466415 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 NOL7Q9UMY1 257 aaKnown RBP13.93□□□□□ -0.18
VPS16-206ENST00000466415 CNPY2Q9Y2B0 182 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 ESYT2A0FGR8 921 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 CXCL11O14625 94 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS16-206ENST00000466415 NR5A1Q13285 461 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 USH1GQ495M9 461 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 PRPF38AQ8NAV1 312 aaKnown RBP13.92□□□□□ -0.18
VPS16-206ENST00000466415 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 CUL5Q93034 780 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 SHISA4Q96DD7 197 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 SCAND2PQ9GZW5 306 aaPredicted RBP13.92□□□□□ -0.18
VPS16-206ENST00000466415 ZMYND12Q9H0C1 365 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 FBXO28Q9NVF7 368 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 PPP1R9AQ9ULJ8 1098 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 PCDHA1Q9Y5I3 950 aa13.92□□□□□ -0.18
VPS16-206ENST00000466415 A0A0G2JLL6 359 aaPredicted RBP13.91□□□□□ -0.18
VPS16-206ENST00000466415 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L15C9J2P7 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L13C9JLJ4 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L11C9JVI0 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 IRF6O14896 467 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
VPS16-206ENST00000466415 ZBED4O75132 1171 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 FDX1P10109 184 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 PRRT2Q7Z6L0 340 aaPredicted RBP13.91□□□□□ -0.18
VPS16-206ENST00000466415 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
VPS16-206ENST00000466415 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
VPS16-206ENST00000466415 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
VPS16-206ENST00000466415 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.18
VPS16-206ENST00000466415 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS16-206ENST00000466415 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 NBR1Q14596 966 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 RILPL1Q5EBL4 403 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
VPS16-206ENST00000466415 KRT25Q7Z3Z0 450 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 REXO1Q8N1G1 1221 aaKnown RBP13.9□□□□□ -0.18
VPS16-206ENST00000466415 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 GDPD2Q9HCC8 539 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
VPS16-206ENST00000466415 CCPG1Q9ULG6 757 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 KCNH4Q9UQ05 1017 aa13.9□□□□□ -0.18
VPS16-206ENST00000466415 ABCB11O95342 1321 aa13.9□□□□□ -0.19
VPS16-206ENST00000466415 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 PRPF40AO75400 957 aaKnown RBP13.89□□□□□ -0.19
VPS16-206ENST00000466415 ITGBL1O95965 494 aaPredicted RBP13.89□□□□□ -0.19
VPS16-206ENST00000466415 IRX3P78415 501 aaPredicted RBP13.89□□□□□ -0.19
VPS16-206ENST00000466415 STK38Q15208 465 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 NPY5RQ15761 445 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 CATSPERGQ6ZRH7 1159 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 PIK3AP1Q6ZUJ8 805 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 RASGRP4Q8TDF6 673 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 WNK4Q96J92 1243 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 PSTPIP2Q9H939 334 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 RIC8AQ9NPQ8 531 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
VPS16-206ENST00000466415 MYPNQ86TC9 1320 aa13.89□□□□□ -0.19
VPS16-206ENST00000466415 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
VPS16-206ENST00000466415 ICAM1P05362 532 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 ATP2B1P20020 1258 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 DSG3P32926 999 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 HUNKP57058 714 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 COG2Q14746 738 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.19
VPS16-206ENST00000466415 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
VPS16-206ENST00000466415 TREML2Q5T2D2 321 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 ANO1Q5XXA6 986 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 CPXCR1Q8N123 301 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 TNFRSF25Q93038 417 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 ATG4CQ96DT6 458 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 POLR3EQ9NVU0 708 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 HOXC10Q9NYD6 342 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 PCDHA6Q9UN73 950 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 PCDHA8Q9Y5H6 950 aa13.88□□□□□ -0.19
VPS16-206ENST00000466415 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 KIF3CO14782 793 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 YEATS4O95619 227 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 OSBPP22059 807 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms