RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 CYP26C1Q6V0L0 522 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 USP49Q70CQ1 688 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 ZNF444Q8N0Y2 327 aaPredicted RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 ADSSL1Q8N142 457 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 PDILTQ8N807 584 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 CEP112Q8N8E3 955 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 GIMAP8Q8ND71 665 aaPredicted RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 HNRNPLLQ8WVV9 542 aaKnown RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 RUBCNQ92622 972 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 ARHGEF1Q92888 912 aaKnown RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 KIFC2Q96AC6 838 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 RRP36Q96EU6 259 aaKnown RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 RPGRIP1Q96KN7 1286 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 DNAJC7Q99615 494 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 MKNK2Q9HBH9 465 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 IL17RBQ9NRM6 502 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 SEC63Q9UGP8 760 aaKnown RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 SWAP70Q9UH65 585 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 SYNPO2Q9UMS6 1093 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 ADGRG1Q9Y653 693 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 PVALEFA0A1B0GWK0 134 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 A0A1W2PQJ5 194 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 KIF5CO60282 957 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 FGFR1OPO95684 399 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 GYPCP04921 128 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 PARP1P09874 1014 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 ZSCAN20P17040 1043 aaPredicted RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 UBA7P41226 1012 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 COPB1P53618 953 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 FKBP1AP62942 108 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 PDIA5Q14554 519 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 BRD3Q15059 726 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 KRT31Q15323 416 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 ELF2Q15723 593 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 MEA1Q16626 185 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 WHAMMP3Q1A5X7 153 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 KMT5BQ4FZB7 885 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 EARS2Q5JPH6 523 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 SPECC1Q5M775 1068 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 TAF3Q5VWG9 929 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 FBXO38Q6PIJ6 1188 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 RSRC2Q7L4I2 434 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 NEK8Q86SG6 692 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 CCDC170Q8IYT3 715 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 TXLNBQ8N3L3 684 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 RPGRQ92834 1020 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 FBXW7Q969H0 707 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 RBM17Q96I25 401 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 C7orf25Q9BPX7 421 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 MRIQ9BWK5 157 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 HAUS4Q9H6D7 363 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 RIOX1Q9H6W3 641 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 SAMSN1Q9NSI8 373 aaKnown RBP7.71□□□□□ -1.18
CDHR3-204ENST00000466351 ANKIB1Q9P2G1 1089 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 GGA1Q9UJY5 639 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 STK24Q9Y6E0 443 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 FLT1P17948 1338 aa7.71□□□□□ -1.18
CDHR3-204ENST00000466351 CYP2D7A0A087X1C5 515 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ANO9A1A5B4 782 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 KCNJ18B7U540 433 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 KLRF2D3W0D1 207 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 N4BP3O15049 544 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 PRDM1O75626 825 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ZRANB2O95218 330 aaKnown RBP eCLIP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 CD44P16070 742 aaKnown RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 CCNE1P24864 410 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 MCM3P25205 808 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 KLRK1P26718 216 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 HNRNPH3P31942 346 aaKnown RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 MCM7P33993 719 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 AFMP43652 599 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 MNX1P50219 401 aaPredicted RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 PIP4K2BP78356 416 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 PSMD2Q13200 908 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 KCNJ12Q14500 433 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 NFIXQ14938 502 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ZNF174Q15697 407 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 GPATCH4Q5T3I0 446 aaKnown RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 RRAGBQ5VZM2 374 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 MOXD1Q6UVY6 613 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 TMCO3Q6UWJ1 677 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ZSCAN29Q8IWY8 852 aaPredicted RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 TRMT44Q8IYL2 757 aaKnown RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 CMTR1Q8N1G2 835 aaKnown RBP7.7□□□□□ -1.18
CDHR3-204ENST00000466351 NELFBQ8WX92 580 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 GOLGA1Q92805 767 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 CCDC17Q96LX7 622 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ERGIC2Q96RQ1 377 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 MTRQ99707 1265 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 TMEM47Q9BQJ4 181 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 EDEM3Q9BZQ6 932 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 COA1Q9GZY4 146 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 GBP3Q9H0R5 595 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 EHD4Q9H223 541 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 CD209Q9NNX6 404 aa7.7□□□□□ -1.18
CDHR3-204ENST00000466351 ABHD10Q9NUJ1 306 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms