RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 A0A1W2PQD8 194 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 OVOL3O00110 214 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 ENDOUP21128 410 aaKnown RBP7.02□□□□□ -1.29
LRCH3-211ENST00000466054 CAP1Q01518 475 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 ZC3H14Q6PJT7 736 aaKnown RBP7.02□□□□□ -1.29
LRCH3-211ENST00000466054 ZPBP2Q6X784 338 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 KIF2CQ99661 725 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 SPATA25Q9BR10 227 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
LRCH3-211ENST00000466054 CHURC1-FNTBB4DL54 471 aa7.01□□□□□ -1.29
LRCH3-211ENST00000466054 HMGA2P52926 109 aa7.01□□□□□ -1.29
LRCH3-211ENST00000466054 ADAM17P78536 824 aa7.01□□□□□ -1.29
LRCH3-211ENST00000466054 ZNF200P98182 395 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-211ENST00000466054 KIR3DS1Q14943 382 aa7.01□□□□□ -1.29
LRCH3-211ENST00000466054 RPTNQ6XPR3 784 aa7.01□□□□□ -1.29
LRCH3-211ENST00000466054 EAF1Q96JC9 268 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-211ENST00000466054 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
LRCH3-211ENST00000466054 FADS2P1A8MWK0 482 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 GBP2P32456 591 aaPredicted RBP7□□□□□ -1.29
LRCH3-211ENST00000466054 CNR2P34972 360 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 PLEKHN1Q494U1 663 aaPredicted RBP7□□□□□ -1.29
LRCH3-211ENST00000466054 LIPIQ6XZB0 460 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 CCDC84Q86UT8 332 aaPredicted RBP7□□□□□ -1.29
LRCH3-211ENST00000466054 USP48Q86UV5 1035 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 NT5DC4Q86YG4 428 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 ADGRG2Q8IZP9 1017 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 PHC3Q8NDX5 983 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 DDX1Q92499 740 aaKnown RBP7□□□□□ -1.29
LRCH3-211ENST00000466054 RHOVQ96L33 236 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 CDADC1Q9BWV3 514 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 KBTBD4Q9NVX7 518 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 TLR6Q9Y2C9 796 aa7□□□□□ -1.29
LRCH3-211ENST00000466054 A0A1B0GTL3 188 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 A0A1W2PQJ5 194 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 MATN3O15232 486 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 GJA9P57773 515 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 LMNB2Q03252 620 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 MLECQ14165 292 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 NR1I3Q14994 352 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 BBS9Q3SYG4 887 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 TMC3Q7Z5M5 1100 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 TGIF2Q9GZN2 237 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 TNFRSF12AQ9NP84 129 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 PMF1-BGLAPU3KQ54 211 aa6.99□□□□□ -1.29
LRCH3-211ENST00000466054 MSL3P1P0C860 447 aa6.98□□□□□ -1.29
LRCH3-211ENST00000466054 MAPKAPK2P49137 400 aa6.98□□□□□ -1.29
LRCH3-211ENST00000466054 CBX2Q14781 532 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-211ENST00000466054 ZNF654Q8IZM8 581 aa6.98□□□□□ -1.29
LRCH3-211ENST00000466054 SORCS2Q96PQ0 1159 aa6.98□□□□□ -1.29
LRCH3-211ENST00000466054 COPRSQ9NQ92 184 aa6.98□□□□□ -1.29
LRCH3-211ENST00000466054 KCNQ5Q9NR82 932 aa6.98□□□□□ -1.29
LRCH3-211ENST00000466054 DDX41Q9UJV9 622 aaKnown RBP6.98□□□□□ -1.29
LRCH3-211ENST00000466054 A0A1W2PQ45 241 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-211ENST00000466054 A0A1W2PQY0 241 aa6.97□□□□□ -1.29
LRCH3-211ENST00000466054 ERCC5P28715 1186 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-211ENST00000466054 GDF5P43026 501 aa6.97□□□□□ -1.29
LRCH3-211ENST00000466054 RAD51AP2Q09MP3 1159 aa6.97□□□□□ -1.29
LRCH3-211ENST00000466054 C9orf131Q5VYM1 1079 aa6.97□□□□□ -1.29
LRCH3-211ENST00000466054 CPZQ66K79 652 aa6.97□□□□□ -1.29
LRCH3-211ENST00000466054 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-211ENST00000466054 HTR3BO95264 441 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 PRAMEF1O95521 474 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 PF4P02776 101 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 RAG1P15918 1043 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 IGFBP6P24592 240 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-211ENST00000466054 EIF4A3P38919 411 aaKnown RBP6.96□□□□□ -1.3
LRCH3-211ENST00000466054 CAMK2GQ13555 558 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-211ENST00000466054 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 LOXL4Q96JB6 756 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 IMPACTQ9P2X3 320 aa6.96□□□□□ -1.3
LRCH3-211ENST00000466054 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-211ENST00000466054 MINDY4BA8MYZ0 360 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 ITGB3P05106 788 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 RANGAP1P46060 587 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-211ENST00000466054 RACK1P63244 317 aaKnown RBP6.95□□□□□ -1.3
LRCH3-211ENST00000466054 FOXO4P98177 505 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 KRTAP1-1Q07627 177 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 VWA3BQ502W6 1294 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 SLCO6A1Q86UG4 719 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 FNIP1Q8TF40 1166 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.95□□□□□ -1.3
LRCH3-211ENST00000466054 ACSL6Q9UKU0 697 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 SUPT16HQ9Y5B9 1047 aaKnown RBP6.95□□□□□ -1.3
LRCH3-211ENST00000466054 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
LRCH3-211ENST00000466054 MEIS1O00470 390 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 GARTP22102 1010 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 NBPF9Q3BBW0 867 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 SNAP47Q5SQN1 464 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 KIAA0825Q8IV33 1275 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 NAT16Q8N8M0 369 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 CHST13Q8NET6 341 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 GATAD2BQ8WXI9 593 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 SPON2Q9BUD6 331 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 CCSER2Q9H7U1 834 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 ERVK13-1Q9NX77 482 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 ADAMTS1Q9UHI8 967 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 DBR1Q9UK59 544 aaKnown RBP6.94□□□□□ -1.3
LRCH3-211ENST00000466054 PCDHGB7Q9Y5F8 929 aa6.94□□□□□ -1.3
LRCH3-211ENST00000466054 IRS2Q9Y4H2 1338 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms