RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 ZBTB43O43298 467 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 PTPREP23469 700 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 SMARCA1P28370 1054 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 RBM25P49756 843 aaKnown RBP21.41■■□□□ 1.02
HOXA9-203ENST00000465941 GNAQP50148 359 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 PRKCZQ05513 592 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 MORN1Q5T089 497 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 CCDC174Q6PII3 467 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 ABRAQ8N0Z2 381 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 SOCS4Q8WXH5 440 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 AGBL1Q96MI9 1066 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 LZTS2Q9BRK4 669 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 MCOLN1Q9GZU1 580 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 ALDH8A1Q9H2A2 487 aaPredicted RBP21.41■■□□□ 1.02
HOXA9-203ENST00000465941 RIOX1Q9H6W3 641 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 JMJD4Q9H9V9 463 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
HOXA9-203ENST00000465941 CWC22Q9HCG8 908 aaKnown RBP21.41■■□□□ 1.02
HOXA9-203ENST00000465941 PDRG1Q9NUG6 133 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 GABRQQ9UN88 632 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 IVNS1ABPQ9Y6Y0 642 aa21.41■■□□□ 1.02
HOXA9-203ENST00000465941 FLT3LGP49771 235 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 APOBRQ0VD83 1088 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 IRF5Q13568 498 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 TOB2Q14106 344 aaPredicted RBP21.4■■□□□ 1.02
HOXA9-203ENST00000465941 TKFCQ3LXA3 575 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 MICU3Q86XE3 530 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 CHST13Q8NET6 341 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 USP6NLQ92738 828 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 NUDT12Q9BQG2 462 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 VAT1LQ9HCJ6 419 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 ZSWIM8A7E2V4 1837 aa21.4■■□□□ 1.02
HOXA9-203ENST00000465941 COL11A1P12107 1806 aaPredicted RBP21.39■■□□□ 1.02
HOXA9-203ENST00000465941 FCER1AP12319 257 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 RXRAP19793 462 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 GRB14Q14449 540 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 PPP2R5BQ15173 497 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 SLC35G1Q2M3R5 365 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.39■■□□□ 1.01
HOXA9-203ENST00000465941 NBPF11Q86T75 865 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 FBXO40Q9UH90 709 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 CCPG1Q9ULG6 757 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 MGAMO43451 1857 aa21.39■■□□□ 1.01
HOXA9-203ENST00000465941 CYTH3O43739 400 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 DHX16O60231 1041 aaKnown RBP21.38■■□□□ 1.01
HOXA9-203ENST00000465941 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 CDC37Q16543 378 aaPredicted RBP21.38■■□□□ 1.01
HOXA9-203ENST00000465941 RAB11FIP4Q86YS3 637 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 CCDC144CPQ8IYA2 1237 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 RAET1EQ8TD07 263 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 SPZ1Q9BXG8 430 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 RBM28Q9NW13 759 aaKnown RBP21.38■■□□□ 1.01
HOXA9-203ENST00000465941 PTCH2Q9Y6C5 1203 aa21.38■■□□□ 1.01
HOXA9-203ENST00000465941 XRCC5P13010 732 aaKnown RBP21.37■■□□□ 1.01
HOXA9-203ENST00000465941 ALAS1P13196 640 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 MAP2K5Q13163 448 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 QRICH1Q2TAL8 776 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 SRBD1Q8N5C6 995 aaKnown RBP21.37■■□□□ 1.01
HOXA9-203ENST00000465941 TRERF1Q96PN7 1200 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 MMP19Q99542 508 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 KIF2CQ99661 725 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 HPS5Q9UPZ3 1129 aa21.37■■□□□ 1.01
HOXA9-203ENST00000465941 ZBTB5O15062 677 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 HOXC6P09630 235 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 ADORA2AP29274 412 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 PDIA3P30101 505 aaKnown RBP21.36■■□□□ 1.01
HOXA9-203ENST00000465941 RGS2P41220 211 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 KCTD2Q14681 263 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 RTN1Q16799 776 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 TMTC3Q6ZXV5 915 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 PXYLP1Q8TE99 480 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 ZNF274Q96GC6 653 aaPredicted RBP21.36■■□□□ 1.01
HOXA9-203ENST00000465941 ACAD9Q9H845 621 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 RNF146Q9NTX7 359 aa21.36■■□□□ 1.01
HOXA9-203ENST00000465941 FAM217BQ9NTX9 383 aaPredicted RBP21.36■■□□□ 1.01
HOXA9-203ENST00000465941 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
HOXA9-203ENST00000465941 CCDC196A0A1B0GTZ2 297 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 GOLGA8AA7E2F4 631 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 GOLGA8BA8MQT2 603 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 PLEKHA8P1O95397 391 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 METAP2P50579 478 aaKnown RBP eCLIP21.35■■□□□ 1.01
HOXA9-203ENST00000465941 NEK4P51957 841 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 ANKRD1Q15327 319 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 HOMER2Q9NSB8 354 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 NID2Q14112 1375 aa21.35■■□□□ 1.01
HOXA9-203ENST00000465941 PNMA6FA0A0J9YX94 578 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 ADCY3O60266 1144 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 CYP2B6P20813 491 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 CDC27P30260 824 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 MUM1L1Q5H9M0 696 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 DPP9Q86TI2 863 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 FBXO11Q86XK2 927 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 CMTR1Q8N1G2 835 aaKnown RBP21.34■■□□□ 1.01
HOXA9-203ENST00000465941 TBC1D32Q96NH3 1257 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 PIGSQ96S52 555 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 AMNQ9BXJ7 453 aa21.34■■□□□ 1.01
HOXA9-203ENST00000465941 COBLO75128 1261 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms