RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 UBA5Q9GZZ9 404 aa30.32■■■□□ 2.44
SMC4-206ENST00000465903 GPHNQ9NQX3 736 aaPredicted RBP30.32■■■□□ 2.44
SMC4-206ENST00000465903 ERICH2A1L162 156 aa30.31■■■□□ 2.44
SMC4-206ENST00000465903 MCM5P33992 734 aa30.31■■■□□ 2.44
SMC4-206ENST00000465903 KCTD2Q14681 263 aa30.31■■■□□ 2.44
SMC4-206ENST00000465903 CHST13Q8NET6 341 aa30.31■■■□□ 2.44
SMC4-206ENST00000465903 KCNB2Q92953 911 aa30.31■■■□□ 2.44
SMC4-206ENST00000465903 MTA3Q9BTC8 594 aa30.31■■■□□ 2.44
SMC4-206ENST00000465903 BAZ2BQ9UIF8 2168 aaKnown RBP30.31■■■□□ 2.44
SMC4-206ENST00000465903 PRC1O43663 620 aa30.3■■■□□ 2.44
SMC4-206ENST00000465903 GJB1P08034 283 aa30.3■■■□□ 2.44
SMC4-206ENST00000465903 PARP1P09874 1014 aaKnown RBP30.3■■■□□ 2.44
SMC4-206ENST00000465903 CACNB2Q08289 660 aaPredicted RBP30.3■■■□□ 2.44
SMC4-206ENST00000465903 SART3Q15020 963 aaKnown RBP30.3■■■□□ 2.44
SMC4-206ENST00000465903 ASPRV1Q53RT3 343 aa30.3■■■□□ 2.44
SMC4-206ENST00000465903 TMEM67Q5HYA8 995 aa30.3■■■□□ 2.44
SMC4-206ENST00000465903 RPTORQ8N122 1335 aa30.29■■■□□ 2.44
SMC4-206ENST00000465903 PGK2P07205 417 aa30.29■■■□□ 2.44
SMC4-206ENST00000465903 PRKAR2AP13861 404 aaKnown RBP30.29■■■□□ 2.44
SMC4-206ENST00000465903 TAL1P17542 331 aaPredicted RBP30.29■■■□□ 2.44
SMC4-206ENST00000465903 ZNF792Q3KQV3 632 aa30.29■■■□□ 2.44
SMC4-206ENST00000465903 STAG2Q8N3U4 1231 aa30.29■■■□□ 2.44
SMC4-206ENST00000465903 LY9Q9HBG7 655 aa30.29■■■□□ 2.44
SMC4-206ENST00000465903 PAK6Q9NQU5 681 aaPredicted RBP30.29■■■□□ 2.44
SMC4-206ENST00000465903 ICAM1P05362 532 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 ALAS1P13196 640 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 HSPA4P34932 840 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 TKFCQ3LXA3 575 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 ADCK5Q3MIX3 580 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 OLFML2BQ68BL8 750 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 MAML3Q96JK9 1138 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 NEK1Q96PY6 1258 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.28■■■□□ 2.44
SMC4-206ENST00000465903 HMX1Q9NP08 348 aaPredicted RBP30.28■■■□□ 2.44
SMC4-206ENST00000465903 HOMER2Q9NSB8 354 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 RNF146Q9NTX7 359 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 SLC5A4Q9NY91 659 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 FBXO40Q9UH90 709 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 MAD2L2Q9UI95 211 aa30.28■■■□□ 2.44
SMC4-206ENST00000465903 DNAJC25-GNG10A0A024R161 153 aa30.27■■■□□ 2.44
SMC4-206ENST00000465903 REC8O95072 547 aa30.27■■■□□ 2.44
SMC4-206ENST00000465903 TROAPQ12815 778 aa30.27■■■□□ 2.44
SMC4-206ENST00000465903 TMEM87BQ96K49 555 aa30.27■■■□□ 2.44
SMC4-206ENST00000465903 TRERF1Q96PN7 1200 aa30.27■■■□□ 2.44
SMC4-206ENST00000465903 CCPG1Q9ULG6 757 aa30.27■■■□□ 2.44
SMC4-206ENST00000465903 DIS3Q9Y2L1 958 aaKnown RBP30.27■■■□□ 2.44
SMC4-206ENST00000465903 MCM3APO60318 1980 aa30.26■■■□□ 2.44
SMC4-206ENST00000465903 PALM3A6NDB9 673 aaPredicted RBP30.26■■■□□ 2.43
SMC4-206ENST00000465903 SH2B2O14492 632 aaPredicted RBP30.26■■■□□ 2.43
SMC4-206ENST00000465903 CYP2C19P33261 490 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 GJA8P48165 433 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 GRM4Q14833 912 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 MUM1L1Q5H9M0 696 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 MFSD14CQ5VZR4 134 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 SHISA4Q96DD7 197 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 ACAD9Q9H845 621 aa30.26■■■□□ 2.43
SMC4-206ENST00000465903 EXOSC10Q01780 885 aaKnown RBP30.25■■■□□ 2.43
SMC4-206ENST00000465903 ADGRF4Q8IZF3 695 aa30.25■■■□□ 2.43
SMC4-206ENST00000465903 DDX11Q96FC9 970 aa30.25■■■□□ 2.43
SMC4-206ENST00000465903 DEFB118Q96PH6 123 aa30.25■■■□□ 2.43
SMC4-206ENST00000465903 LRRC2Q9BYS8 371 aa30.25■■■□□ 2.43
SMC4-206ENST00000465903 LCTP09848 1927 aa30.25■■■□□ 2.43
SMC4-206ENST00000465903 EPB41L2O43491 1005 aaKnown RBP30.24■■■□□ 2.43
SMC4-206ENST00000465903 SGPL1O95470 568 aa30.24■■■□□ 2.43
SMC4-206ENST00000465903 CCND3P30281 292 aaPredicted RBP30.24■■■□□ 2.43
SMC4-206ENST00000465903 ANKRD35Q8N283 1001 aa30.24■■■□□ 2.43
SMC4-206ENST00000465903 U2AF1L4Q8WU68 220 aaKnown RBP30.24■■■□□ 2.43
SMC4-206ENST00000465903 A1CFQ9NQ94 594 aaKnown RBP30.24■■■□□ 2.43
SMC4-206ENST00000465903 SNX14Q9Y5W7 946 aa30.24■■■□□ 2.43
SMC4-206ENST00000465903 KLRF2D3W0D1 207 aa30.23■■■□□ 2.43
SMC4-206ENST00000465903 LIFRP42702 1097 aa30.23■■■□□ 2.43
SMC4-206ENST00000465903 KRT32Q14532 448 aa30.23■■■□□ 2.43
SMC4-206ENST00000465903 SLC35G1Q2M3R5 365 aa30.23■■■□□ 2.43
SMC4-206ENST00000465903 USP26Q9BXU7 913 aa30.23■■■□□ 2.43
SMC4-206ENST00000465903 JMJD4Q9H9V9 463 aa30.23■■■□□ 2.43
SMC4-206ENST00000465903 WDR19Q8NEZ3 1342 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 FRMPD3Q5JV73 1810 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 CDC37Q16543 378 aaPredicted RBP30.22■■■□□ 2.43
SMC4-206ENST00000465903 DHX32Q7L7V1 743 aaKnown RBP30.22■■■□□ 2.43
SMC4-206ENST00000465903 CATIPQ7Z7H3 387 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 ZNF654Q8IZM8 581 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 TMTC2Q8N394 836 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 TRPV1Q8NER1 839 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 FGD4Q96M96 766 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 CRISPLD2Q9H0B8 497 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 VAT1LQ9HCJ6 419 aa30.22■■■□□ 2.43
SMC4-206ENST00000465903 MLLT1Q03111 559 aaPredicted RBP30.21■■■□□ 2.43
SMC4-206ENST00000465903 CYBAP13498 195 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 CLEC4DQ8WXI8 215 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 MTMR8Q96EF0 704 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 TCEANC2Q96MN5 208 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 TINF2Q9BSI4 451 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 MYL10Q9BUA6 226 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 PNMA2Q9UL42 364 aa30.2■■■□□ 2.43
SMC4-206ENST00000465903 PRAMEF19Q5SWL8 479 aa30.19■■■□□ 2.42
SMC4-206ENST00000465903 FAM133AQ8N9E0 248 aa30.19■■■□□ 2.42
SMC4-206ENST00000465903 NUP133Q8WUM0 1156 aa30.19■■■□□ 2.42
SMC4-206ENST00000465903 MAP3K14Q99558 947 aa30.19■■■□□ 2.42
SMC4-206ENST00000465903 TNRC18O15417 2968 aaPredicted RBP30.18■■■□□ 2.42
SMC4-206ENST00000465903 DDAH1O94760 285 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms