RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 CXXC1Q9P0U4 656 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-206ENST00000465673 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-206ENST00000465673 MCM3APO60318 1980 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 ELP1O95163 1332 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 UMODL1Q5DID0 1318 aa12.35□□□□□ -0.43
GPNMB-206ENST00000465673 MUC3AQ02505 3323 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 IGKV6D-41A0A0C4DH26 115 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 ZBED4O75132 1171 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 GJA9P57773 515 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 ABHD16BQ9H3Z7 469 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 SLC38A10Q9HBR0 1119 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 GREB1LQ9C091 1923 aaPredicted RBP12.34□□□□□ -0.43
GPNMB-206ENST00000465673 ASTN1O14525 1302 aa12.34□□□□□ -0.43
GPNMB-206ENST00000465673 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
GPNMB-206ENST00000465673 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 SNAP25P60880 206 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
GPNMB-206ENST00000465673 MIER1Q8N108 512 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
GPNMB-206ENST00000465673 GRIN2DO15399 1336 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 MYH7P12883 1935 aa12.33□□□□□ -0.44
GPNMB-206ENST00000465673 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 M0R2C6 588 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 CD4P01730 458 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 COL9A1P20849 921 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 IGFBP4P22692 258 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 RABGGTBP53611 331 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 CCL23P55773 120 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 RASGRP2Q7LDG7 609 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 OTOP2Q7RTS6 562 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
GPNMB-206ENST00000465673 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
GPNMB-206ENST00000465673 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 TRPV6Q9H1D0 765 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 PDGFCQ9NRA1 345 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
GPNMB-206ENST00000465673 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 CHD9Q3L8U1 2897 aa12.32□□□□□ -0.44
GPNMB-206ENST00000465673 TMEM232C9JQI7 657 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 GPAA1O43292 621 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 APPP05067 770 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 MYOGP15173 224 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 PSMC6P62333 389 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 TNFAIP2Q03169 654 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 C20orf194Q5TEA3 1177 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 EEPD1Q7L9B9 569 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 ZNF444Q8N0Y2 327 aaPredicted RBP12.31□□□□□ -0.44
GPNMB-206ENST00000465673 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 MKL1Q969V6 931 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 SEC62Q99442 399 aaKnown RBP12.31□□□□□ -0.44
GPNMB-206ENST00000465673 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 A1CFQ9NQ94 594 aaKnown RBP12.31□□□□□ -0.44
GPNMB-206ENST00000465673 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 ZNF536O15090 1300 aa12.31□□□□□ -0.44
GPNMB-206ENST00000465673 RBAK-RBAKDNI3L0D1 243 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 DYNC1LI2O43237 492 aaPredicted RBP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 FGBP02675 491 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 BMP3P12645 472 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 SMPD1P17405 629 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 TDO2P48775 406 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 ADAMTS19Q8TE59 1207 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 HERVK_113Q902F9 699 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 APPBP2Q92624 585 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 VWCEQ96DN2 955 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 NECAB3Q96P71 396 aaPredicted RBP12.3□□□□□ -0.44
GPNMB-206ENST00000465673 ASB2Q96Q27 587 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
GPNMB-206ENST00000465673 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms