RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 TINF2Q9BSI4 451 aa18.28■□□□□ 0.52
SCAP-209ENST00000465628 DIS3Q9Y2L1 958 aaKnown RBP18.28■□□□□ 0.52
SCAP-209ENST00000465628 SEPT4O43236 478 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 PLA2G6O60733 806 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 NEFLP07196 543 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 PDHBP11177 359 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 NOVP48745 357 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 TTBK2Q6IQ55 1244 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 TRERF1Q96PN7 1200 aa18.27■□□□□ 0.52
SCAP-209ENST00000465628 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
SCAP-209ENST00000465628 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.52
SCAP-209ENST00000465628 ALPK3Q96L96 1907 aa18.27■□□□□ 0.51
SCAP-209ENST00000465628 TNKSO95271 1327 aa18.26■□□□□ 0.51
SCAP-209ENST00000465628 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
SCAP-209ENST00000465628 TKFCQ3LXA3 575 aa18.26■□□□□ 0.51
SCAP-209ENST00000465628 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
SCAP-209ENST00000465628 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
SCAP-209ENST00000465628 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
SCAP-209ENST00000465628 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
SCAP-209ENST00000465628 PFASO15067 1338 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 POTEB2H3BUK9 544 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 RARBP10826 455 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 ZNF543Q08ER8 600 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
SCAP-209ENST00000465628 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
SCAP-209ENST00000465628 ZNF536O15090 1300 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 SYNGAP1Q96PV0 1343 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 DNM1LO00429 736 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 SGSM2O43147 1006 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 DHX16O60231 1041 aaKnown RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 ICAM1P05362 532 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 TAL1P17542 331 aaPredicted RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 PTH1RQ03431 593 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 IFIT1BQ5T764 474 aaKnown RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 CHRDL2Q6WN34 429 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 NSMFQ6X4W1 530 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 MSL3Q8N5Y2 521 aaKnown RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 ARRDC4Q8NCT1 418 aa18.24■□□□□ 0.51
SCAP-209ENST00000465628 SENP6Q9GZR1 1112 aaPredicted RBP18.24■□□□□ 0.51
SCAP-209ENST00000465628 MCM3APO60318 1980 aa18.23■□□□□ 0.51
SCAP-209ENST00000465628 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
SCAP-209ENST00000465628 AKR1A1P14550 325 aa18.23■□□□□ 0.51
SCAP-209ENST00000465628 GPATCH4Q5T3I0 446 aaKnown RBP18.23■□□□□ 0.51
SCAP-209ENST00000465628 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
SCAP-209ENST00000465628 ENAHQ8N8S7 591 aaPredicted RBP18.23■□□□□ 0.51
SCAP-209ENST00000465628 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
SCAP-209ENST00000465628 XPNPEP3Q9NQH7 507 aa18.23■□□□□ 0.51
SCAP-209ENST00000465628 ZSWIM5Q9P217 1185 aa18.23■□□□□ 0.51
SCAP-209ENST00000465628 ZMYND8Q9ULU4 1186 aaPredicted RBP18.23■□□□□ 0.51
SCAP-209ENST00000465628 ERICH2A1L162 156 aa18.22■□□□□ 0.51
SCAP-209ENST00000465628 IGHA2P01877 340 aa18.22■□□□□ 0.51
SCAP-209ENST00000465628 ATN1P54259 1190 aaPredicted RBP18.22■□□□□ 0.51
SCAP-209ENST00000465628 BTNL9Q6UXG8 535 aa18.22■□□□□ 0.51
SCAP-209ENST00000465628 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.22■□□□□ 0.51
SCAP-209ENST00000465628 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 CYP21A2P08686 494 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 PARP1P09874 1014 aaKnown RBP18.21■□□□□ 0.51
SCAP-209ENST00000465628 CNTN2Q02246 1040 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
SCAP-209ENST00000465628 ASPRV1Q53RT3 343 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 MUM1L1Q5H9M0 696 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCAP-209ENST00000465628 ARMCX2Q7L311 632 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 ZNF467Q7Z7K2 595 aaPredicted RBP18.21■□□□□ 0.51
SCAP-209ENST00000465628 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
SCAP-209ENST00000465628 PNMA2Q9UL42 364 aa18.21■□□□□ 0.51
SCAP-209ENST00000465628 RBM8AQ9Y5S9 174 aaKnown RBP18.21■□□□□ 0.51
SCAP-209ENST00000465628 SNHG28P0DPA3 235 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 COL6A1P12109 1028 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 USH1GQ495M9 461 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 NOL8Q76FK4 1167 aaKnown RBP18.2■□□□□ 0.5
SCAP-209ENST00000465628 RNF180Q86T96 592 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 CPVLQ9H3G5 476 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
SCAP-209ENST00000465628 COLQQ9Y215 455 aaPredicted RBP18.2■□□□□ 0.5
SCAP-209ENST00000465628 SMCHD1A6NHR9 2005 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
SCAP-209ENST00000465628 PGK1P00558 417 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 ZNF865P0CJ78 1059 aaPredicted RBP18.19■□□□□ 0.5
SCAP-209ENST00000465628 SYN1P17600 705 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 ACVR2BQ13705 512 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 LRRC41Q15345 812 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
SCAP-209ENST00000465628 LRRC26Q2I0M4 334 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 HABP4Q5JVS0 413 aaKnown RBP18.19■□□□□ 0.5
SCAP-209ENST00000465628 MAMDC4Q6UXC1 1216 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 ESYT1Q9BSJ8 1104 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 UBA5Q9GZZ9 404 aa18.19■□□□□ 0.5
SCAP-209ENST00000465628 ABHD16BQ9H3Z7 469 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms