RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 WDR19Q8NEZ3 1342 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 VWA5AO00534 786 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 RIOX2Q8IUF8 465 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 TMTC2Q8N394 836 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 MMP19Q99542 508 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 PPP1R9AQ9ULJ8 1098 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 STXBP5LQ9Y2K9 1186 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 SNX14Q9Y5W7 946 aa20.42■□□□□ 0.86
CPSF4-209ENST00000465132 B4E1Z4 1266 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 TTLL1O95922 423 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 MYCNP04198 464 aaPredicted RBP20.41■□□□□ 0.86
CPSF4-209ENST00000465132 PGK2P07205 417 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 STAT3P40763 770 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 SNX17Q15036 470 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 LRRC41Q15345 812 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 FAM47AQ5JRC9 791 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 FAM83BQ5T0W9 1011 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 BLOC1S2Q6QNY1 142 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 DGKHQ86XP1 1220 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 TMEM87BQ96K49 555 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 NRBP1Q9UHY1 535 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 NEDD4P46934 1319 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 PARP14Q460N5 1801 aa20.41■□□□□ 0.86
CPSF4-209ENST00000465132 DLL1O00548 723 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 RAD21O60216 631 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 SEC24BO95487 1268 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 FGD1P98174 961 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 KCTD2Q14681 263 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 DHX32Q7L7V1 743 aaKnown RBP20.4■□□□□ 0.86
CPSF4-209ENST00000465132 REPS2Q8NFH8 660 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 JAKMIP1Q96N16 626 aaKnown RBP20.4■□□□□ 0.86
CPSF4-209ENST00000465132 ZSWIM5Q9P217 1185 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 NYAP2Q9P242 653 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-209ENST00000465132 CYP46A1Q9Y6A2 500 aa20.4■□□□□ 0.86
CPSF4-209ENST00000465132 COPB2P35606 906 aa20.39■□□□□ 0.85
CPSF4-209ENST00000465132 ADCYAP1R1P41586 468 aa20.39■□□□□ 0.85
CPSF4-209ENST00000465132 RBM25P49756 843 aaKnown RBP20.39■□□□□ 0.85
CPSF4-209ENST00000465132 ZNF792Q3KQV3 632 aa20.39■□□□□ 0.85
CPSF4-209ENST00000465132 TRIM60Q495X7 471 aa20.39■□□□□ 0.85
CPSF4-209ENST00000465132 ZSCAN10Q96SZ4 725 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-209ENST00000465132 TINF2Q9BSI4 451 aa20.39■□□□□ 0.85
CPSF4-209ENST00000465132 MTMR4Q9NYA4 1195 aa20.39■□□□□ 0.85
CPSF4-209ENST00000465132 DIS3Q9Y2L1 958 aaKnown RBP20.39■□□□□ 0.85
CPSF4-209ENST00000465132 GREB1LQ9C091 1923 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-209ENST00000465132 POTEB2H3BUK9 544 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 C1orf53Q5VUE5 145 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 FAM109BQ6ICB4 259 aaPredicted RBP20.38■□□□□ 0.85
CPSF4-209ENST00000465132 RASEFQ8IZ41 740 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 FERMT2Q96AC1 680 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 XPNPEP3Q9NQH7 507 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 PRDM5Q9NQX1 630 aaPredicted RBP20.38■□□□□ 0.85
CPSF4-209ENST00000465132 STX8Q9UNK0 236 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 COL6A3P12111 3177 aa20.38■□□□□ 0.85
CPSF4-209ENST00000465132 IFIT3O14879 490 aaKnown RBP20.37■□□□□ 0.85
CPSF4-209ENST00000465132 PRC1O43663 620 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 RARBP10826 455 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 TAL1P17542 331 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-209ENST00000465132 CASTP20810 708 aaKnown RBP20.37■□□□□ 0.85
CPSF4-209ENST00000465132 MB21D2Q8IYB1 491 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-209ENST00000465132 MKL1Q969V6 931 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-209ENST00000465132 SLF1Q9BQI6 1058 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 INCENPQ9NQS7 918 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 PHF24Q9UPV7 400 aa20.37■□□□□ 0.85
CPSF4-209ENST00000465132 MYH4Q9Y623 1939 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 IGKV6D-41A0A0C4DH26 115 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 TOP1P11387 765 aaKnown RBP20.36■□□□□ 0.85
CPSF4-209ENST00000465132 WTAPQ15007 396 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 IFIT1BQ5T764 474 aaKnown RBP20.36■□□□□ 0.85
CPSF4-209ENST00000465132 STOX1Q6ZVD7 989 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 RUFY3Q7L099 469 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 CEP95Q96GE4 821 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 TEX13BQ9BXU2 312 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 PDLIM7Q9NR12 457 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 CLIP2Q9UDT6 1046 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 COL11A1P12107 1806 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-209ENST00000465132 LTBP2Q14767 1821 aa20.36■□□□□ 0.85
CPSF4-209ENST00000465132 TNKSO95271 1327 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 F5H6K3 240 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 NDUFB10O96000 172 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 ZNF865P0CJ78 1059 aaPredicted RBP20.35■□□□□ 0.85
CPSF4-209ENST00000465132 KLRC3Q07444 240 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 TMEM67Q5HYA8 995 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 ANKS1AQ92625 1134 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 ZSWIM6Q9HCJ5 1215 aa20.35■□□□□ 0.85
CPSF4-209ENST00000465132 DNAH12Q6ZR08 3092 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 ZNFX1Q9P2E3 1918 aaKnown RBP20.34■□□□□ 0.85
CPSF4-209ENST00000465132 TRIM43BA6NCK2 446 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 PGK1P00558 417 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 RPS6KB1P23443 525 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 LIFRP42702 1097 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 SHHQ15465 462 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 SNRNP48Q6IEG0 339 aaKnown RBP20.34■□□□□ 0.85
CPSF4-209ENST00000465132 SH3RF1Q7Z6J0 888 aa20.34■□□□□ 0.85
CPSF4-209ENST00000465132 RNF180Q86T96 592 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms