RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ISY1Q9ULR0 285 aaKnown RBP27.03■■□□□ 1.92
USP42-205ENST00000465073 RAG1P15918 1043 aa27.02■■□□□ 1.92
USP42-205ENST00000465073 SLC1A4P43007 532 aa27.02■■□□□ 1.92
USP42-205ENST00000465073 CCSAPQ6IQ19 270 aaPredicted RBP27.02■■□□□ 1.92
USP42-205ENST00000465073 TMEM39AQ9NV64 488 aa27.02■■□□□ 1.92
USP42-205ENST00000465073 DCDC2CA8MYV0 355 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 ITGB8P26012 769 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 CST5P28325 142 aaPredicted RBP27.01■■□□□ 1.91
USP42-205ENST00000465073 SMAD3P84022 425 aaKnown RBP27.01■■□□□ 1.91
USP42-205ENST00000465073 CCDC144BQ3MJ40 725 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 ARMCX2Q7L311 632 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 FAM161BQ96MY7 647 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 ACAD9Q9H845 621 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 SPC25Q9HBM1 224 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 HOMER2Q9NSB8 354 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.01■■□□□ 1.91
USP42-205ENST00000465073 SALL3Q9BXA9 1300 aa27.01■■□□□ 1.91
USP42-205ENST00000465073 TSPY2A6NKD2 308 aa27■■□□□ 1.91
USP42-205ENST00000465073 FOXP2O15409 715 aa27■■□□□ 1.91
USP42-205ENST00000465073 PLA2G6O60733 806 aa27■■□□□ 1.91
USP42-205ENST00000465073 MCCP23508 829 aa27■■□□□ 1.91
USP42-205ENST00000465073 IKQ13123 557 aaPredicted RBP27■■□□□ 1.91
USP42-205ENST00000465073 PCSK9Q8NBP7 692 aaKnown RBP27■■□□□ 1.91
USP42-205ENST00000465073 ELP1O95163 1332 aa27■■□□□ 1.91
USP42-205ENST00000465073 FAAP100Q0VG06 881 aa27■■□□□ 1.91
USP42-205ENST00000465073 TKFCQ3LXA3 575 aa27■■□□□ 1.91
USP42-205ENST00000465073 ANKRD45Q5TZF3 282 aa27■■□□□ 1.91
USP42-205ENST00000465073 CCDC129Q6ZRS4 1044 aa27■■□□□ 1.91
USP42-205ENST00000465073 UPF3AQ9H1J1 476 aaKnown RBP27■■□□□ 1.91
USP42-205ENST00000465073 STX8Q9UNK0 236 aa27■■□□□ 1.91
USP42-205ENST00000465073 C6orf222P0C671 652 aaPredicted RBP26.99■■□□□ 1.91
USP42-205ENST00000465073 CTDSPL2Q05D32 466 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 RCSD1Q6JBY9 416 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 CCDC144CPQ8IYA2 1237 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 FAM133AQ8N9E0 248 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 EVI5LQ96CN4 794 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 AGBL1Q96MI9 1066 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 GLT1D1Q96MS3 346 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 IL17RBQ9NRM6 502 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 ANAPC4Q9UJX5 808 aa26.99■■□□□ 1.91
USP42-205ENST00000465073 ZNF536O15090 1300 aa26.98■■□□□ 1.91
USP42-205ENST00000465073 MYADML2A6NDP7 307 aa26.98■■□□□ 1.91
USP42-205ENST00000465073 GJA9P57773 515 aa26.98■■□□□ 1.91
USP42-205ENST00000465073 CNTN2Q02246 1040 aa26.98■■□□□ 1.91
USP42-205ENST00000465073 RNF146Q9NTX7 359 aa26.98■■□□□ 1.91
USP42-205ENST00000465073 ADCY6O43306 1168 aa26.97■■□□□ 1.91
USP42-205ENST00000465073 ASGR1P07306 291 aa26.97■■□□□ 1.91
USP42-205ENST00000465073 RRP1P56182 461 aaKnown RBP26.97■■□□□ 1.91
USP42-205ENST00000465073 FPGSQ05932 587 aa26.97■■□□□ 1.91
USP42-205ENST00000465073 SEMA6BQ9H3T3 888 aa26.97■■□□□ 1.91
USP42-205ENST00000465073 A1CFQ9NQ94 594 aaKnown RBP26.97■■□□□ 1.91
USP42-205ENST00000465073 INCENPQ9NQS7 918 aa26.97■■□□□ 1.91
USP42-205ENST00000465073 MROH7Q68CQ1 1323 aa26.97■■□□□ 1.91
USP42-205ENST00000465073 EPHB4P54760 987 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 ALX1Q15699 326 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 GNASQ5JWF2 1037 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 KCTD1Q719H9 257 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 RNPC3Q96LT9 517 aaKnown RBP26.96■■□□□ 1.91
USP42-205ENST00000465073 TRERF1Q96PN7 1200 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 KATNBL1Q9H079 304 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 HELLSQ9NRZ9 838 aa26.96■■□□□ 1.91
USP42-205ENST00000465073 CUL9Q8IWT3 2517 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 ASB14A6NK59 587 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 RANBP6O60518 1105 aaKnown RBP26.95■■□□□ 1.91
USP42-205ENST00000465073 NMT2O60551 498 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 CDK7P50613 346 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 NKX3-2P78367 333 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 VTI1AQ96AJ9 217 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 CHMP4CQ96CF2 233 aa26.95■■□□□ 1.91
USP42-205ENST00000465073 ORC4O43929 436 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 TIMP1P01033 207 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 ALAS1P13196 640 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 NOVP48745 357 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 IRX5P78411 483 aaPredicted RBP26.94■■□□□ 1.9
USP42-205ENST00000465073 VPS53Q5VIR6 699 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 TICAM2Q86XR7 235 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 CDX2Q99626 313 aaPredicted RBP26.94■■□□□ 1.9
USP42-205ENST00000465073 PRR12Q9ULL5 1215 aa26.94■■□□□ 1.9
USP42-205ENST00000465073 SOWAHBA6NEL2 793 aa26.93■■□□□ 1.9
USP42-205ENST00000465073 FGRP09769 529 aa26.93■■□□□ 1.9
USP42-205ENST00000465073 PDE1AP54750 535 aa26.93■■□□□ 1.9
USP42-205ENST00000465073 TNFAIP2Q03169 654 aa26.93■■□□□ 1.9
USP42-205ENST00000465073 TBX21Q9UL17 535 aa26.93■■□□□ 1.9
USP42-205ENST00000465073 A0A0U1RQG5 324 aaPredicted RBP26.93■■□□□ 1.9
USP42-205ENST00000465073 HDAC1Q13547 482 aaPredicted RBP26.93■■□□□ 1.9
USP42-205ENST00000465073 CCDC174Q6PII3 467 aa26.93■■□□□ 1.9
USP42-205ENST00000465073 ARVCFO00192 962 aa26.92■■□□□ 1.9
USP42-205ENST00000465073 NOL8Q76FK4 1167 aaKnown RBP26.92■■□□□ 1.9
USP42-205ENST00000465073 DCAF4Q8WV16 495 aa26.92■■□□□ 1.9
USP42-205ENST00000465073 CTAGE5O15320 804 aa26.91■■□□□ 1.9
USP42-205ENST00000465073 SNAP25P60880 206 aa26.91■■□□□ 1.9
USP42-205ENST00000465073 CRBNQ96SW2 442 aa26.91■■□□□ 1.9
USP42-205ENST00000465073 TTYH1Q9H313 450 aaPredicted RBP26.91■■□□□ 1.9
USP42-205ENST00000465073 CYP39A1Q9NYL5 469 aa26.91■■□□□ 1.9
USP42-205ENST00000465073 MCM3APO60318 1980 aa26.9■■□□□ 1.9
USP42-205ENST00000465073 TMEM265A0A087WTH1 108 aa26.9■■□□□ 1.9
USP42-205ENST00000465073 MCMDC2Q4G0Z9 681 aa26.9■■□□□ 1.9
USP42-205ENST00000465073 MFSD5Q6N075 450 aa26.9■■□□□ 1.9
USP42-205ENST00000465073 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.9■■□□□ 1.9
USP42-205ENST00000465073 CCPG1Q9ULG6 757 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms