RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ZBTB21Q9ULJ3 1066 aa11.6□□□□□ -0.55
APP-213ENST00000464867 PCDHA11Q9Y5I1 949 aa11.6□□□□□ -0.55
APP-213ENST00000464867 SLC4A7Q9Y6M7 1214 aa11.6□□□□□ -0.55
APP-213ENST00000464867 ZNF236Q9UL36 1845 aa11.6□□□□□ -0.55
APP-213ENST00000464867 KDM4AO75164 1064 aa11.59□□□□□ -0.55
APP-213ENST00000464867 GDF11O95390 407 aa11.59□□□□□ -0.55
APP-213ENST00000464867 PHKA1P46020 1223 aa11.59□□□□□ -0.55
APP-213ENST00000464867 RABGGTBP53611 331 aa11.59□□□□□ -0.55
APP-213ENST00000464867 MECOMQ03112 1051 aa11.59□□□□□ -0.55
APP-213ENST00000464867 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
APP-213ENST00000464867 OTOP2Q7RTS6 562 aa11.59□□□□□ -0.55
APP-213ENST00000464867 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
APP-213ENST00000464867 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
APP-213ENST00000464867 WDFY4Q6ZS81 3184 aa11.59□□□□□ -0.55
APP-213ENST00000464867 COBLO75128 1261 aa11.58□□□□□ -0.56
APP-213ENST00000464867 AKR1A1P14550 325 aa11.58□□□□□ -0.56
APP-213ENST00000464867 TMEM67Q5HYA8 995 aa11.58□□□□□ -0.56
APP-213ENST00000464867 ANKRD44Q8N8A2 993 aa11.58□□□□□ -0.56
APP-213ENST00000464867 SHCBP1Q8NEM2 672 aa11.58□□□□□ -0.56
APP-213ENST00000464867 MAML3Q96JK9 1138 aa11.58□□□□□ -0.56
APP-213ENST00000464867 REPIN1Q9BWE0 567 aaKnown RBP11.58□□□□□ -0.56
APP-213ENST00000464867 MOV10L1Q9BXT6 1211 aaKnown RBP11.58□□□□□ -0.56
APP-213ENST00000464867 MROH8Q9H579 483 aa11.58□□□□□ -0.56
APP-213ENST00000464867 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
APP-213ENST00000464867 HOXC10Q9NYD6 342 aa11.58□□□□□ -0.56
APP-213ENST00000464867 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
APP-213ENST00000464867 ELP1O95163 1332 aa11.58□□□□□ -0.56
APP-213ENST00000464867 PDS5AQ29RF7 1337 aaKnown RBP11.58□□□□□ -0.56
APP-213ENST00000464867 BRWD1Q9NSI6 2320 aa11.57□□□□□ -0.56
APP-213ENST00000464867 ZBBXA8MT70 800 aa11.57□□□□□ -0.56
APP-213ENST00000464867 RFXAPO00287 272 aa11.57□□□□□ -0.56
APP-213ENST00000464867 VAMP4O75379 141 aa11.57□□□□□ -0.56
APP-213ENST00000464867 FCER1AP12319 257 aa11.57□□□□□ -0.56
APP-213ENST00000464867 MYOGP15173 224 aa11.57□□□□□ -0.56
APP-213ENST00000464867 VCAM1P19320 739 aa11.57□□□□□ -0.56
APP-213ENST00000464867 ERCC3P19447 782 aa11.57□□□□□ -0.56
APP-213ENST00000464867 JAG1P78504 1218 aa11.57□□□□□ -0.56
APP-213ENST00000464867 CCDC102BQ68D86 513 aa11.57□□□□□ -0.56
APP-213ENST00000464867 RPUSD2Q8IZ73 545 aaKnown RBP11.57□□□□□ -0.56
APP-213ENST00000464867 ABRAQ8N0Z2 381 aa11.57□□□□□ -0.56
APP-213ENST00000464867 CD320Q9NPF0 282 aa11.57□□□□□ -0.56
APP-213ENST00000464867 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
APP-213ENST00000464867 CNPY2Q9Y2B0 182 aa11.57□□□□□ -0.56
APP-213ENST00000464867 CDK5RAP2Q96SN8 1893 aa11.57□□□□□ -0.56
APP-213ENST00000464867 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
APP-213ENST00000464867 GDF9O60383 454 aa11.56□□□□□ -0.56
APP-213ENST00000464867 BAG3O95817 575 aa11.56□□□□□ -0.56
APP-213ENST00000464867 HLA-DOAP06340 250 aa11.56□□□□□ -0.56
APP-213ENST00000464867 ATP2A2P16615 1042 aaKnown RBP11.56□□□□□ -0.56
APP-213ENST00000464867 RASGRF1Q13972 1273 aa11.56□□□□□ -0.56
APP-213ENST00000464867 PLS1Q14651 629 aa11.56□□□□□ -0.56
APP-213ENST00000464867 COG2Q14746 738 aa11.56□□□□□ -0.56
APP-213ENST00000464867 KCNA10Q16322 511 aa11.56□□□□□ -0.56
APP-213ENST00000464867 NCAPG2Q86XI2 1143 aa11.56□□□□□ -0.56
APP-213ENST00000464867 PCSK9Q8NBP7 692 aaKnown RBP11.56□□□□□ -0.56
APP-213ENST00000464867 MFSD14AQ96MC6 490 aa11.56□□□□□ -0.56
APP-213ENST00000464867 SPATC1LQ9H0A9 340 aa11.56□□□□□ -0.56
APP-213ENST00000464867 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
APP-213ENST00000464867 SPC25Q9HBM1 224 aa11.56□□□□□ -0.56
APP-213ENST00000464867 A0A0U1RQG5 324 aaPredicted RBP11.55□□□□□ -0.56
APP-213ENST00000464867 ARVCFO00192 962 aa11.55□□□□□ -0.56
APP-213ENST00000464867 DCXO43602 365 aa11.55□□□□□ -0.56
APP-213ENST00000464867 ZMYND10O75800 440 aa11.55□□□□□ -0.56
APP-213ENST00000464867 GH2P01242 217 aa11.55□□□□□ -0.56
APP-213ENST00000464867 CYP2C18P33260 490 aa11.55□□□□□ -0.56
APP-213ENST00000464867 CLCN1P35523 988 aa11.55□□□□□ -0.56
APP-213ENST00000464867 CDK7P50613 346 aa11.55□□□□□ -0.56
APP-213ENST00000464867 PRR20EP86478 221 aa11.55□□□□□ -0.56
APP-213ENST00000464867 PRR20CP86479 221 aa11.55□□□□□ -0.56
APP-213ENST00000464867 PRR20DP86480 221 aa11.55□□□□□ -0.56
APP-213ENST00000464867 PRR20BP86481 221 aa11.55□□□□□ -0.56
APP-213ENST00000464867 PRR20AP86496 221 aa11.55□□□□□ -0.56
APP-213ENST00000464867 RAB3GAP1Q15042 981 aa11.55□□□□□ -0.56
APP-213ENST00000464867 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
APP-213ENST00000464867 FAM178BQ8IXR5 827 aa11.55□□□□□ -0.56
APP-213ENST00000464867 ARNTL2Q8WYA1 636 aa11.55□□□□□ -0.56
APP-213ENST00000464867 TINF2Q9BSI4 451 aa11.55□□□□□ -0.56
APP-213ENST00000464867 KIAA1683Q9H0B3 1180 aa11.55□□□□□ -0.56
APP-213ENST00000464867 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
APP-213ENST00000464867 RAI14Q9P0K7 980 aa11.55□□□□□ -0.56
APP-213ENST00000464867 IL16Q14005 1332 aa11.55□□□□□ -0.56
APP-213ENST00000464867 A0A0G2JMZ2 1700 aa11.55□□□□□ -0.56
APP-213ENST00000464867 ADAMTS4O75173 837 aa11.54□□□□□ -0.56
APP-213ENST00000464867 CA3P07451 260 aa11.54□□□□□ -0.56
APP-213ENST00000464867 SHROOM1Q2M3G4 852 aaPredicted RBP11.54□□□□□ -0.56
APP-213ENST00000464867 KRT40Q6A162 431 aa11.54□□□□□ -0.56
APP-213ENST00000464867 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
APP-213ENST00000464867 MB21D1Q8N884 522 aa11.54□□□□□ -0.56
APP-213ENST00000464867 SH3RF3Q8TEJ3 882 aaPredicted RBP11.54□□□□□ -0.56
APP-213ENST00000464867 NSUN4Q96CB9 384 aaKnown RBP11.54□□□□□ -0.56
APP-213ENST00000464867 SIL1Q9H173 461 aa11.54□□□□□ -0.56
APP-213ENST00000464867 HIPK3Q9H422 1215 aa11.54□□□□□ -0.56
APP-213ENST00000464867 FAM184BQ9ULE4 1060 aa11.54□□□□□ -0.56
APP-213ENST00000464867 SYNRGQ9UMZ2 1314 aa11.54□□□□□ -0.56
APP-213ENST00000464867 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
APP-213ENST00000464867 ZNF318Q5VUA4 2279 aa11.53□□□□□ -0.56
APP-213ENST00000464867 KIF28PB7ZC32 967 aa11.53□□□□□ -0.56
APP-213ENST00000464867 HOXA2O43364 376 aa11.53□□□□□ -0.56
APP-213ENST00000464867 CIAO1O76071 339 aa11.53□□□□□ -0.56
APP-213ENST00000464867 C6orf222P0C671 652 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms