RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 CTCFLQ8NI51 663 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 KLRG1Q96E93 195 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 CAPNS2Q96L46 248 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 ZNF341Q9BYN7 854 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 ELP3Q9H9T3 547 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 PCDHB6Q9Y5E3 794 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 ATRNL1Q5VV63 1379 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 VGLL4Q14135 290 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 DHX8Q14562 1220 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 LDLRAD1Q5T700 205 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■□□□□ 9.2
SEC61A1-203ENST00000464451 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 HOOK2Q96ED9 719 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 ZIC5Q96T25 663 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 PI4KBQ9UBF8 816 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
SEC61A1-203ENST00000464451 TRIM75PA6NK02 468 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 BMP15O95972 392 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 KANK3Q6NY19 840 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 ANKRD13AQ8IZ07 590 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 SLC10A4Q96EP9 437 aa13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 DHX36Q9H2U1 1008 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-203ENST00000464451 SMC2O95347 1197 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 MYL5Q02045 173 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 RRP1BQ14684 758 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 PCDHA5Q9Y5H7 936 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 BAZ2AQ9UIF9 1905 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 PHF20L1A8MW92 1017 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 FAM155AB1AL88 458 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 POLR2DO15514 142 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 SKILP12757 684 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 GRIN1Q05586 938 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 POSTNQ15063 836 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 SHROOM1Q2M3G4 852 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 FAM47AQ5JRC9 791 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 SPECC1Q5M775 1068 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 ISM2Q6H9L7 571 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 CSADQ9Y600 493 aa13.78□□□□□ -0.2
SEC61A1-203ENST00000464451 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.2
SEC61A1-203ENST00000464451 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.2
SEC61A1-203ENST00000464451 MYH1P12882 1939 aa13.77□□□□□ -0.2
SEC61A1-203ENST00000464451 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.2
SEC61A1-203ENST00000464451 OTOFQ9HC10 1997 aa13.77□□□□□ -0.2
SEC61A1-203ENST00000464451 NMT2O60551 498 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 ATP2B1P20020 1258 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 KIF5BP33176 963 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 NT5DC1Q5TFE4 455 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 CCDC84Q86UT8 332 aaPredicted RBP13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 FOXP4Q8IVH2 680 aaPredicted RBP13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 SNCAIPQ9Y6H5 919 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 SIPA1L1O43166 1804 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 PCNTO95613 3336 aa13.77□□□□□ -0.21
SEC61A1-203ENST00000464451 hCG_1642624A0A1W2PR95 340 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 ECE1P42892 770 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 FANCCQ00597 558 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 ARID5BQ14865 1188 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 DGKHQ86XP1 1220 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 SRBD1Q8N5C6 995 aaKnown RBP13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 SLC44A5Q8NCS7 719 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 FERMT2Q96AC1 680 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 CSRNP2Q9H175 543 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 ZNF112Q9UJU3 913 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 TBC1D12O60347 775 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 GDF11O95390 407 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 SLC10A3P09131 477 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 GJA5P36382 358 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 JAG1P78504 1218 aa13.76□□□□□ -0.21
SEC61A1-203ENST00000464451 CCZ1BP86790 482 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms