RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 MKL1Q969V6 931 aa7.07□□□□□ -1.28
USP25-207ENST00000464435 MRFAP1L1Q96HT8 127 aa7.07□□□□□ -1.28
USP25-207ENST00000464435 PRAMEF1O95521 474 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 BMP8BP34820 402 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 ERVFC1P60507 584 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 SNW1Q13573 536 aaKnown RBP7.06□□□□□ -1.28
USP25-207ENST00000464435 PRR23BQ6ZRT6 265 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 IRF2BP1Q8IU81 584 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 NLGN1Q8N2Q7 840 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 G6PC3Q9BUM1 346 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 SLC6A17Q9H1V8 727 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 FBXL21Q9UKT6 434 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 PCDHB10Q9UN67 800 aa7.06□□□□□ -1.28
USP25-207ENST00000464435 RPL10P27635 214 aaKnown RBP7.05□□□□□ -1.28
USP25-207ENST00000464435 FXNQ16595 210 aa7.05□□□□□ -1.28
USP25-207ENST00000464435 CCDC144CPQ8IYA2 1237 aa7.05□□□□□ -1.28
USP25-207ENST00000464435 ZNF512BQ96KM6 892 aaPredicted RBP7.05□□□□□ -1.28
USP25-207ENST00000464435 FOXP3Q9BZS1 431 aa7.05□□□□□ -1.28
USP25-207ENST00000464435 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
USP25-207ENST00000464435 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
USP25-207ENST00000464435 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 DDAH1O94760 285 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 TSPAN15O95858 294 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 GSNP06396 782 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 SYPP08247 313 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 WAPLQ7Z5K2 1190 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 FAM178BQ8IXR5 827 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 KLHL6Q8WZ60 621 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 MAP6Q96JE9 813 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 SLC26A8Q96RN1 970 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 EPB41L4BQ9H329 900 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
USP25-207ENST00000464435 TNFRSF10DQ9UBN6 386 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 ZMYM5Q9UJ78 669 aa7.04□□□□□ -1.28
USP25-207ENST00000464435 YBX2Q9Y2T7 364 aaKnown RBP7.04□□□□□ -1.28
USP25-207ENST00000464435 A0A087WZG4 1122 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 TLDC2A0PJX2 215 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 TMEM82A0PJX8 343 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 NRDCO43847 1150 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 PPFIBP1Q86W92 1011 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
USP25-207ENST00000464435 RNF32Q9H0A6 362 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 CCDC113Q9H0I3 377 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 DCP1AQ9NPI6 582 aaPredicted RBP7.03□□□□□ -1.28
USP25-207ENST00000464435 CRTAC1Q9NQ79 661 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 FAM86C1Q9NVL1 165 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
USP25-207ENST00000464435 ZNF214Q9UL59 606 aaPredicted RBP7.03□□□□□ -1.28
USP25-207ENST00000464435 PDPK1O15530 556 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 ZNF205O95201 554 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 TDRD10Q5VZ19 366 aaKnown RBP7.02□□□□□ -1.29
USP25-207ENST00000464435 C19orf44Q9H6X5 657 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 PHAXQ9H814 394 aaKnown RBP7.02□□□□□ -1.29
USP25-207ENST00000464435 KANSL2Q9H9L4 492 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 CADPSQ9ULU8 1353 aa7.02□□□□□ -1.29
USP25-207ENST00000464435 C9IYK1 514 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 PEX10O60683 326 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 TRHRP34981 398 aaPredicted RBP7.01□□□□□ -1.29
USP25-207ENST00000464435 RAP1GAPP47736 663 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 RASGRF1Q13972 1273 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 SDE2Q6IQ49 451 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 SYDE1Q6ZW31 735 aaPredicted RBP7.01□□□□□ -1.29
USP25-207ENST00000464435 LRP10Q7Z4F1 713 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
USP25-207ENST00000464435 DIRC2Q96SL1 478 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 DNAJC7Q99615 494 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 DSCC1Q9BVC3 393 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 GPR160Q9UJ42 338 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 FHOD1Q9Y613 1164 aa7.01□□□□□ -1.29
USP25-207ENST00000464435 HRKO00198 91 aa7□□□□□ -1.29
USP25-207ENST00000464435 NFIBO00712 420 aa7□□□□□ -1.29
USP25-207ENST00000464435 SHOXO15266 292 aa7□□□□□ -1.29
USP25-207ENST00000464435 VAV1P15498 845 aa7□□□□□ -1.29
USP25-207ENST00000464435 CTSKP43235 329 aa7□□□□□ -1.29
USP25-207ENST00000464435 NOP2P46087 812 aaKnown RBP7□□□□□ -1.29
USP25-207ENST00000464435 TCEAL1Q15170 157 aa7□□□□□ -1.29
USP25-207ENST00000464435 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
USP25-207ENST00000464435 NOL9Q5SY16 702 aaKnown RBP7□□□□□ -1.29
USP25-207ENST00000464435 CWF19L1Q69YN2 538 aaKnown RBP7□□□□□ -1.29
USP25-207ENST00000464435 KIAA1211LQ6NV74 962 aa7□□□□□ -1.29
USP25-207ENST00000464435 SPATC1Q76KD6 591 aa7□□□□□ -1.29
USP25-207ENST00000464435 NLRX1Q86UT6 975 aa7□□□□□ -1.29
USP25-207ENST00000464435 LILRB2Q8N423 598 aa7□□□□□ -1.29
USP25-207ENST00000464435 SHISA4Q96DD7 197 aa7□□□□□ -1.29
USP25-207ENST00000464435 HHIPL1Q96JK4 782 aa7□□□□□ -1.29
USP25-207ENST00000464435 RNPC3Q96LT9 517 aaKnown RBP7□□□□□ -1.29
USP25-207ENST00000464435 GP6Q9HCN6 339 aa7□□□□□ -1.29
USP25-207ENST00000464435 PFDN2Q9UHV9 154 aa7□□□□□ -1.29
USP25-207ENST00000464435 A0A1W2PQ45 241 aaPredicted RBP6.99□□□□□ -1.29
USP25-207ENST00000464435 A0A1W2PQY0 241 aa6.99□□□□□ -1.29
USP25-207ENST00000464435 WTIPA6NIX2 430 aaPredicted RBP6.99□□□□□ -1.29
USP25-207ENST00000464435 FADS2P1A8MWK0 482 aa6.99□□□□□ -1.29
USP25-207ENST00000464435 PSPNO60542 156 aa6.99□□□□□ -1.29
USP25-207ENST00000464435 DIAPH1O60610 1272 aaKnown RBP6.99□□□□□ -1.29
USP25-207ENST00000464435 TMEM253P0C7T8 217 aa6.99□□□□□ -1.29
USP25-207ENST00000464435 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms