RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 TMEM253P0C7T8 217 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 HSPA5P11021 654 aaKnown RBP7.42□□□□□ -1.22
CD46-211ENST00000464082 HOXA5P20719 270 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 ORC1Q13415 861 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 FAM196AQ6ZSG2 479 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 UBE3DQ7Z6J8 389 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 MARCH10Q8NA82 808 aaPredicted RBP7.42□□□□□ -1.22
CD46-211ENST00000464082 RNF214Q8ND24 703 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 STK35Q8TDR2 534 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 IP6K1Q92551 441 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 CAMKK2Q96RR4 588 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 PRDM10Q9NQV6 1147 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 TAF1LQ8IZX4 1826 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 NCAPD2Q15021 1401 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 MEGF6O75095 1541 aa7.42□□□□□ -1.22
CD46-211ENST00000464082 QSER1Q2KHR3 1735 aa7.41□□□□□ -1.22
CD46-211ENST00000464082 TMEM238LA0A1B0GVL6 79 aa7.41□□□□□ -1.22
CD46-211ENST00000464082 HOXC9P31274 260 aa7.41□□□□□ -1.22
CD46-211ENST00000464082 ZNF211Q13398 564 aaPredicted RBP7.41□□□□□ -1.22
CD46-211ENST00000464082 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
CD46-211ENST00000464082 EZH2Q15910 746 aaKnown RBP7.41□□□□□ -1.22
CD46-211ENST00000464082 ATP13A1Q9HD20 1204 aa7.41□□□□□ -1.22
CD46-211ENST00000464082 RTL1A6NKG5 1358 aa7.41□□□□□ -1.22
CD46-211ENST00000464082 EOMESO95936 686 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 GDNFP39905 211 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 ERVK-24P63145 666 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 RRS1Q15050 365 aaKnown RBP7.4□□□□□ -1.22
CD46-211ENST00000464082 DDB1Q16531 1140 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 CIAPIN1Q6FI81 312 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 PRPF40BQ6NWY9 871 aaKnown RBP7.4□□□□□ -1.22
CD46-211ENST00000464082 ANKRD24Q8TF21 1146 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 COG3Q96JB2 828 aa7.4□□□□□ -1.22
CD46-211ENST00000464082 COL24A1Q17RW2 1714 aa7.4□□□□□ -1.23
CD46-211ENST00000464082 PARD3Q8TEW0 1356 aa7.39□□□□□ -1.23
CD46-211ENST00000464082 ETV2O00321 342 aaPredicted RBP7.39□□□□□ -1.23
CD46-211ENST00000464082 ABL1P00519 1130 aa7.39□□□□□ -1.23
CD46-211ENST00000464082 CLCN7P51798 805 aa7.39□□□□□ -1.23
CD46-211ENST00000464082 DCP1AQ9NPI6 582 aaPredicted RBP7.39□□□□□ -1.23
CD46-211ENST00000464082 SMG5Q9UPR3 1016 aaKnown RBP7.39□□□□□ -1.23
CD46-211ENST00000464082 SMG6Q86US8 1419 aaKnown RBP7.38□□□□□ -1.23
CD46-211ENST00000464082 KIF24Q5T7B8 1368 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 GNAT3A8MTJ3 354 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 MED14OSP0DP75 135 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 NTF4P34130 210 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 HSPA12BQ96MM6 686 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 SEMA3GQ9NS98 782 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 CSADQ9Y600 493 aa7.38□□□□□ -1.23
CD46-211ENST00000464082 NSD2O96028 1365 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 INSRP06213 1382 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 FLT4P35916 1363 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 TCAF2A6NFQ2 919 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 TMEM88BA6NKF7 163 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 NUAK1O60285 661 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 CPNE3O75131 537 aaKnown RBP7.37□□□□□ -1.23
CD46-211ENST00000464082 IL2RBP14784 551 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 HSP90AB2PQ58FF8 381 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 PPM1JQ5JR12 505 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 NBPF6Q5VWK0 638 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 RELTQ969Z4 430 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 NBPF4Q96M43 638 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 EPB41L4BQ9H329 900 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 NLRP2Q9NX02 1062 aa7.37□□□□□ -1.23
CD46-211ENST00000464082 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 C5P01031 1676 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 PRR33A8MZF0 331 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 PLSCR1O15162 318 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 KCNQ2O43526 872 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 GRM2Q14416 872 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 MAP1SQ66K74 1059 aaPredicted RBP7.36□□□□□ -1.23
CD46-211ENST00000464082 MPRIPQ6WCQ1 1025 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 CCDC74AQ96AQ1 378 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 LTV1Q96GA3 475 aaPredicted RBP7.36□□□□□ -1.23
CD46-211ENST00000464082 TMEM39AQ9NV64 488 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 GPN3Q9UHW5 284 aaPredicted RBP7.36□□□□□ -1.23
CD46-211ENST00000464082 SCN11AQ9UI33 1791 aa7.36□□□□□ -1.23
CD46-211ENST00000464082 KIF7Q2M1P5 1343 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 UBR3Q6ZT12 1888 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 EXOC5O00471 708 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
CD46-211ENST00000464082 GLDCP23378 1020 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 AMPHP49418 695 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 LINC00310P59036 64 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
CD46-211ENST00000464082 SULF2Q8IWU5 870 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 USHBP1Q8N6Y0 703 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 GPBAR1Q8TDU6 330 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 IRF2BPLQ9H1B7 796 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 PANK3Q9H999 370 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 PRDM5Q9NQX1 630 aaPredicted RBP7.35□□□□□ -1.23
CD46-211ENST00000464082 POLKQ9UBT6 870 aa7.35□□□□□ -1.23
CD46-211ENST00000464082 CGNL1Q0VF96 1302 aa7.34□□□□□ -1.23
CD46-211ENST00000464082 NEFLP07196 543 aa7.34□□□□□ -1.23
CD46-211ENST00000464082 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
CD46-211ENST00000464082 R3HDM1Q15032 1099 aaKnown RBP7.34□□□□□ -1.23
CD46-211ENST00000464082 CDKAL1Q5VV42 579 aa7.34□□□□□ -1.23
CD46-211ENST00000464082 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.23
CD46-211ENST00000464082 KCNN1Q92952 543 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms