RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PRDM5Q9NQX1 630 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-204ENST00000463622 SNCAIPQ9Y6H5 919 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 COL14A1Q05707 1796 aaKnown RBP5.14□□□□□ -1.59
SCFD1-204ENST00000463622 BCL9O00512 1426 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 SSH2Q76I76 1423 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 MAP3K5Q99683 1374 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 GNAT3A8MTJ3 354 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 PAPLNO95428 1278 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 ITGB5P18084 799 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 TXKP42681 527 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 TAF1CQ15572 869 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-204ENST00000463622 SLC15A2Q16348 729 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 FBXO33Q7Z6M2 555 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 HID1Q8IV36 788 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 HIRIP3Q9BW71 556 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-204ENST00000463622 MIR1-1HGQ9H1L0 117 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 EIF3AQ14152 1382 aaKnown RBP5.13□□□□□ -1.59
SCFD1-204ENST00000463622 IGF2BP3O00425 579 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCFD1-204ENST00000463622 CBX7O95931 251 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 RPS26P62854 115 aaKnown RBP5.13□□□□□ -1.59
SCFD1-204ENST00000463622 FGD1P98174 961 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 IKZF1Q13422 519 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 TXNRD1Q16881 649 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 CDH24Q86UP0 819 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 MARCH10Q8NA82 808 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-204ENST00000463622 LRRN4CLQ8ND94 238 aa5.13□□□□□ -1.59
SCFD1-204ENST00000463622 GCP02774 474 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 PGRP06401 933 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 LETMD1Q6P1Q0 360 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 TMC4Q7Z404 712 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 HSPA12BQ96MM6 686 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 STK32BQ9NY57 414 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 TJP2Q9UDY2 1190 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 CORINQ9Y5Q5 1042 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 USP19O94966 1318 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 KIF1BO60333 1816 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 CAMTA1Q9Y6Y1 1673 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 DLC1Q96QB1 1528 aa5.12□□□□□ -1.59
SCFD1-204ENST00000463622 PPLO60437 1756 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ZP2Q05996 745 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 DDB1Q16531 1140 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ANGEL2Q5VTE6 544 aaKnown RBP5.11□□□□□ -1.59
SCFD1-204ENST00000463622 OGFOD2Q6N063 350 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 BNC2Q6ZN30 1099 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-204ENST00000463622 PHC3Q8NDX5 983 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ASIC4Q96FT7 647 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ATP13A1Q9HD20 1204 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 SNX11Q9Y5W9 270 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 RREB1Q92766 1687 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 CLSPNQ9HAW4 1339 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 POLR3AO14802 1390 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-204ENST00000463622 AATKQ6ZMQ8 1374 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 USP31Q70CQ4 1352 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 OVOS2A0A0G2JMS6 1433 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 OVOS2A0A0J9YW53 1432 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 OVOS2Q6IE36 1432 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 FAM155AB1AL88 458 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-204ENST00000463622 H3BS24 57 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 CST3P01034 146 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-204ENST00000463622 SFRP5Q5T4F7 317 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 MFSD2AQ8NA29 543 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ASB11Q8WXH4 323 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 VTI1BQ9UEU0 232 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 KNDC1Q76NI1 1749 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ABCA3Q99758 1704 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 TRPM3Q9HCF6 1732 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-204ENST00000463622 IFT172Q9UG01 1749 aa5.11□□□□□ -1.59
SCFD1-204ENST00000463622 ALS2Q96Q42 1657 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 NUP188Q5SRE5 1749 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 UPK3BL1B0FP48 263 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 UPK3BL2E5RIL1 263 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 SORBS3O60504 671 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 JUNBP17275 347 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-204ENST00000463622 GPR162Q16538 588 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 CCDC27Q2M243 656 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 MAPK8IP1Q9UQF2 711 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 ACEP12821 1306 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 PITPNM2Q9BZ72 1349 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 TONSLQ96HA7 1378 aa5.1□□□□□ -1.59
SCFD1-204ENST00000463622 MINDY4BA8MYZ0 360 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 PF4P02776 101 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 CAP2P40123 477 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 RPL6Q02878 288 aaKnown RBP5.09□□□□□ -1.59
SCFD1-204ENST00000463622 FAM160A1Q05DH4 1040 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 CAMK2GQ13555 558 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-204ENST00000463622 TSNAXIP1Q2TAA8 658 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 MFSD4AQ8N468 514 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 ACSF2Q96CM8 615 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-204ENST00000463622 TMEM87BQ96K49 555 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 NOC4LQ9BVI4 516 aaKnown RBP5.09□□□□□ -1.59
SCFD1-204ENST00000463622 CDK19Q9BWU1 502 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 MRS2Q9HD23 443 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 SEMA3GQ9NS98 782 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-204ENST00000463622 CRB1P82279 1406 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 ATP7BP35670 1465 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 TULP4Q9NRJ4 1543 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 NRKQ7Z2Y5 1582 aa5.09□□□□□ -1.59
SCFD1-204ENST00000463622 WASH4PA8MWX3 477 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 401.7 ms