RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 TTC14Q96N46 770 aa24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 PRR12Q9ULL5 1215 aa24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 ATN1P54259 1190 aaPredicted RBP24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 RNF180Q86T96 592 aa24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 FAM133AQ8N9E0 248 aa24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 TMEM47Q9BQJ4 181 aa24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 RNF41Q9H4P4 317 aaPredicted RBP24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 FAM184BQ9ULE4 1060 aa24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 LAMA3Q16787 3333 aa24.25■■□□□ 1.47
PDLIM4-205ENST00000463615 ADAMTS4O75173 837 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 ADCYAP1R1P41586 468 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 LRIT3Q3SXY7 679 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 MFSD6Q6ZSS7 791 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 TDHQ8IZJ6 230 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 AGBL1Q96MI9 1066 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 TSEN34Q9BSV6 310 aaKnown RBP24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 ABHD16BQ9H3Z7 469 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 TOMM22Q9NS69 142 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 RNF146Q9NTX7 359 aa24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 SUPT16HQ9Y5B9 1047 aaKnown RBP24.24■■□□□ 1.47
PDLIM4-205ENST00000463615 SOX1O00570 391 aaPredicted RBP24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 SLC4A3P48751 1232 aa24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 IKQ13123 557 aaPredicted RBP24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 GPR153Q6NV75 609 aa24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 TBC1D10CQ8IV04 446 aa24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 RANBP17Q9H2T7 1088 aaKnown RBP24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 A1CFQ9NQ94 594 aaKnown RBP24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.23■■□□□ 1.47
PDLIM4-205ENST00000463615 DUSP11O75319 330 aaKnown RBP24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 HAND2P61296 217 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 ACVR2BQ13705 512 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 RRP12Q5JTH9 1297 aaKnown RBP24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 RASGRP2Q7LDG7 609 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 KLHDC9Q8NEP7 349 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 DSCC1Q9BVC3 393 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 UBE2OQ9C0C9 1292 aaKnown RBP24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 KATNBL1Q9H079 304 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 DIAPH3Q9NSV4 1193 aa24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 ISY1Q9ULR0 285 aaKnown RBP24.22■■□□□ 1.47
PDLIM4-205ENST00000463615 POTEB2H3BUK9 544 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 PGK1P00558 417 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 ICAM1P05362 532 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 SNHG28P0DPA3 235 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 CWC27Q6UX04 472 aaKnown RBP24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 ARMCX2Q7L311 632 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 TRERF1Q96PN7 1200 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 HOMER2Q9NSB8 354 aa24.21■■□□□ 1.47
PDLIM4-205ENST00000463615 SYNRGQ9UMZ2 1314 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 LAMA4Q16363 1823 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 ZNF213O14771 459 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 PDHBP11177 359 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 CST5P28325 142 aaPredicted RBP24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 NKX3-2P78367 333 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 CCSAPQ6IQ19 270 aaPredicted RBP24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 ESR2Q92731 530 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 ATP11BQ9Y2G3 1177 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 DNAH12Q6ZR08 3092 aa24.2■■□□□ 1.46
PDLIM4-205ENST00000463615 MOXD2PA6NHM9 499 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 CNTN2Q02246 1040 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 CCDC96Q2M329 555 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 TRIM60Q495X7 471 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 DGKHQ86XP1 1220 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 CCDC144CPQ8IYA2 1237 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 UPF3AQ9H1J1 476 aaKnown RBP24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 PRKAG2Q9UGJ0 569 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 ZHX1Q9UKY1 873 aaPredicted RBP24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 PNMA2Q9UL42 364 aa24.19■■□□□ 1.46
PDLIM4-205ENST00000463615 NEDD4P46934 1319 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 SOWAHBA6NEL2 793 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 ASB14A6NK59 587 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 MYCNP04198 464 aaPredicted RBP24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 ALAS1P13196 640 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 MDM2Q00987 491 aaPredicted RBP24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 CCDC178Q5BJE1 867 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 SYDE2Q5VT97 1194 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 TTBK2Q6IQ55 1244 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 CCDC174Q6PII3 467 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 ANKS1AQ92625 1134 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 FERMT2Q96AC1 680 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 LENG1Q96BZ8 264 aaPredicted RBP24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 LBHD1Q9BQE6 289 aaPredicted RBP24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 CYP39A1Q9NYL5 469 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 CCPG1Q9ULG6 757 aa24.18■■□□□ 1.46
PDLIM4-205ENST00000463615 LTBP2Q14767 1821 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 MCM3APO60318 1980 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 A0A1W2PQ45 241 aaPredicted RBP24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 A0A1W2PQY0 241 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 PDE4AP27815 886 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 ZNF543Q08ER8 600 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 CCDC144BQ3MJ40 725 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 MUM1L1Q5H9M0 696 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 CHMP4CQ96CF2 233 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 LRCH3Q96II8 777 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 PDLIM7Q9NR12 457 aa24.17■■□□□ 1.46
PDLIM4-205ENST00000463615 LOC102724159A0A0B4J2E5 919 aa24.16■■□□□ 1.46
PDLIM4-205ENST00000463615 ADCY6O43306 1168 aa24.16■■□□□ 1.46
PDLIM4-205ENST00000463615 ACLYP53396 1101 aa24.16■■□□□ 1.46
PDLIM4-205ENST00000463615 GJA9P57773 515 aa24.16■■□□□ 1.46
PDLIM4-205ENST00000463615 SNAP25P60880 206 aa24.16■■□□□ 1.46
PDLIM4-205ENST00000463615 PWP2Q15269 919 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms