RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SP3Q02447 781 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 NOLC1Q14978 699 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 SF3A1Q15459 793 aaKnown RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 AXDND1Q5T1B0 1012 aaPredicted RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 KRT40Q6A162 431 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 C17orf99Q6UX52 265 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 GADL1Q6ZQY3 521 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 TNS4Q8IZW8 715 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 KIAA1524Q8TCG1 905 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 NAT10Q9H0A0 1025 aaKnown RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 MORC2Q9Y6X9 1032 aaPredicted RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
PTPRD-207ENST00000463477 CCDC196A0A1B0GTZ2 297 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 MINDY4BA8MYZ0 360 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 GOLGA6L19H0YKK7 550 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 NT5C2P49902 561 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 NFXL1Q6ZNB6 911 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 ELOA2Q8IYF1 753 aaPredicted RBP11.35□□□□□ -0.59
PTPRD-207ENST00000463477 CEP57L1Q8IYX8 460 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 TTC12Q9H892 705 aaPredicted RBP11.35□□□□□ -0.59
PTPRD-207ENST00000463477 ZNF287Q9HBT7 754 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
PTPRD-207ENST00000463477 RANBP6O60518 1105 aaKnown RBP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 FGRP09769 529 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 HOXA7P31268 230 aaPredicted RBP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 CTDSPL2Q05D32 466 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 PPARAQ07869 468 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 MTMR2Q13614 643 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 TRIM29Q14134 588 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 WTAPQ15007 396 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 SEPT2Q15019 361 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 CTU1Q7Z7A3 348 aaKnown RBP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 PRIMPOLQ96LW4 560 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 PARK7Q99497 189 aaKnown RBP11.34□□□□□ -0.59
PTPRD-207ENST00000463477 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 TACC3Q9Y6A5 838 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 ROBO3Q96MS0 1386 aa11.34□□□□□ -0.59
PTPRD-207ENST00000463477 ERICH2A1L162 156 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 MPHOSPH10O00566 681 aaKnown RBP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 AKR1B1P15121 316 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 NDUFA8P51970 172 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 USP14P54578 494 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 PTPAQ15257 358 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 TREML2Q5T2D2 321 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 C12orf42Q96LP6 360 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 MAP3K14Q99558 947 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 TRIM5Q9C035 493 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 MKNK2Q9HBH9 465 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 SENP2Q9HC62 589 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 HPSEQ9Y251 543 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 R3HCC1Q9Y3T6 440 aaKnown RBP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 ADGRA2Q96PE1 1338 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 A0A1B0GVL5 298 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 NEMFO60524 1076 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 CUTAO60888 179 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 DEXIO95424 95 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 SLC3A2P08195 630 aaKnown RBP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 CYP2C8P10632 490 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 DGKZQ13574 1117 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 SEC23AQ15436 765 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 RTN1Q16799 776 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 SIAH1Q8IUQ4 282 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 TRIM22Q8IYM9 498 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 ZNF444Q8N0Y2 327 aaPredicted RBP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 ACER1Q8TDN7 264 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 ESR2Q92731 530 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 SDF4Q9BRK5 362 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
PTPRD-207ENST00000463477 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 PNMA3Q9UL41 463 aa11.33□□□□□ -0.6
PTPRD-207ENST00000463477 A0A1W2PRG0 241 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 ZNF202O95125 648 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 BCRP11274 1271 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 RASA1P20936 1047 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 OSBPP22059 807 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 PDE4BQ07343 736 aa11.32□□□□□ -0.6
PTPRD-207ENST00000463477 DHX8Q14562 1220 aaKnown RBP11.32□□□□□ -0.6
PTPRD-207ENST00000463477 ARHGEF6Q15052 776 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms