RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 NR5A1Q13285 461 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 GRM4Q14833 912 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 CCDC93Q567U6 631 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 TEX35Q5T0J7 233 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 C12orf60Q5U649 245 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 CDKAL1Q5VV42 579 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 WWC2Q6AWC2 1192 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 DTHD1Q6ZMT9 781 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 BICDL1Q6ZP65 573 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 FOXP4Q8IVH2 680 aaPredicted RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 BLIDQ8IZY5 108 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 ZNF710Q8N1W2 664 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 CCDC24Q8N4L8 307 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 GPR161Q8N6U8 529 aaKnown RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 CEP112Q8N8E3 955 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 CNBD1Q8NA66 436 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 SMC1BQ8NDV3 1235 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 SDR42E1Q8WUS8 393 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 SYMPKQ92797 1274 aaKnown RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 TNFRSF25Q93038 417 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 CNKSR1Q969H4 720 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 DHX58Q96C10 678 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 FAM163AQ96GL9 167 aaPredicted RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 PAGE5Q96GU1 130 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 MASTLQ96GX5 879 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 DHTKD1Q96HY7 919 aaPredicted RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 MYL10Q9BUA6 226 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 CCSER1Q9C0I3 900 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 GBP3Q9H0R5 595 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 HSD3B7Q9H2F3 369 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 MKNK2Q9HBH9 465 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 SENP2Q9HC62 589 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 C6orf50Q9HD87 102 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 GJB4Q9NTQ9 266 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 TRMT1Q9NXH9 659 aaKnown RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 MCM9Q9NXL9 1143 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 MAGEC2Q9UBF1 373 aaPredicted RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 LIMA1Q9UHB6 759 aaKnown RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 PPP2R2CQ9Y2T4 447 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 COL11A2P13942 1736 aaPredicted RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 WDR90Q96KV7 1748 aa5.3□□□□□ -1.56
VPS72-203ENST00000463470 TNRC6CQ9HCJ0 1690 aaKnown RBP5.3□□□□□ -1.56
VPS72-203ENST00000463470 MYO3BQ8WXR4 1341 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 CNTNAP5Q8WYK1 1306 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 A0A1W2PQC6 194 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ESYT2A0FGR8 921 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 VWA3AA6NCI4 1184 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 FAM177BA6PVY3 158 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 FZD9O00144 591 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 PPFIA3O75145 1194 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ERLIN1O75477 346 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 BBOX1O75936 387 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 IPO7O95373 1038 aaKnown RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 ITGBL1O95965 494 aaPredicted RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 TSPY3P0CV98 308 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 TSPY8P0CW00 308 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ATP1A3P13637 1013 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 FECHP22830 423 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 GUCY1A2P33402 732 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 STAT6P42226 847 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 KRT83P78385 493 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 CACNB1Q02641 598 aaPredicted RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 GRAPQ13588 217 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 CUL4BQ13620 913 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 MFSD10Q14728 455 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 SEPT2Q15019 361 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 COBLL1Q53SF7 1204 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 PPP1R18Q6NYC8 613 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 TMCO3Q6UWJ1 677 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 CYP26C1Q6V0L0 522 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 SYT10Q6XYQ8 523 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 IFNL1Q8IU54 200 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 MSL3Q8N5Y2 521 aaKnown RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 PDILTQ8N807 584 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 IGSF22Q8N9C0 903 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 PNMA1Q8ND90 353 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 GRAPLQ8TC17 118 aaPredicted RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 RABGGTAQ92696 567 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ERCC4Q92889 916 aaPredicted RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 FBXW7Q969H0 707 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 RRP36Q96EU6 259 aaKnown RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 RPGRIP1Q96KN7 1286 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 PSMD1Q99460 953 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ZKSCAN3Q9BRR0 538 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 SPZ1Q9BXG8 430 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 TAOK3Q9H2K8 898 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 ACBD3Q9H3P7 528 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 THAP9Q9H5L6 903 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 BARHL2Q9NY43 387 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 VPS54Q9P1Q0 977 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 SEC63Q9UGP8 760 aaKnown RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 ZNF215Q9UL58 517 aaPredicted RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 V9GYY5 206 aaPredicted RBP5.29□□□□□ -1.56
VPS72-203ENST00000463470 MAST2Q6P0Q8 1798 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 MYH6P13533 1939 aa5.29□□□□□ -1.56
VPS72-203ENST00000463470 CACNA1SQ13698 1873 aa5.28□□□□□ -1.56
VPS72-203ENST00000463470 CCDC88AQ3V6T2 1871 aa5.28□□□□□ -1.56
VPS72-203ENST00000463470 ABCB11O95342 1321 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms