RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 SLC3A2P08195 630 aaKnown RBP23.54■■□□□ 1.36
VARS-221ENST00000463184 C6orf222P0C671 652 aaPredicted RBP23.54■■□□□ 1.36
VARS-221ENST00000463184 TSPY3P0CV98 308 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 TSPY8P0CW00 308 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 BMP3P12645 472 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 CCDC144BQ3MJ40 725 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 SLFN13Q68D06 897 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 ARMCX2Q7L311 632 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 LRRC47Q8N1G4 583 aaKnown RBP23.54■■□□□ 1.36
VARS-221ENST00000463184 MYLIPQ8WY64 445 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 FGD4Q96M96 766 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
VARS-221ENST00000463184 PLIN4Q96Q06 1357 aa23.53■■□□□ 1.36
VARS-221ENST00000463184 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.53■■□□□ 1.36
VARS-221ENST00000463184 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.53■■□□□ 1.36
VARS-221ENST00000463184 MYADML2A6NDP7 307 aa23.53■■□□□ 1.36
VARS-221ENST00000463184 ASGR1P07306 291 aa23.53■■□□□ 1.36
VARS-221ENST00000463184 CDK7P50613 346 aa23.53■■□□□ 1.36
VARS-221ENST00000463184 GJA9P57773 515 aa23.53■■□□□ 1.36
VARS-221ENST00000463184 UPF3AQ9H1J1 476 aaKnown RBP23.53■■□□□ 1.36
VARS-221ENST00000463184 TTC41PQ6P2S7 1318 aa23.53■■□□□ 1.36
VARS-221ENST00000463184 ERC2O15083 957 aa23.52■■□□□ 1.36
VARS-221ENST00000463184 CHURC1Q8WUH1 139 aa23.52■■□□□ 1.36
VARS-221ENST00000463184 VTI1AQ96AJ9 217 aa23.52■■□□□ 1.36
VARS-221ENST00000463184 TBX21Q9UL17 535 aa23.52■■□□□ 1.36
VARS-221ENST00000463184 A0A0U1RQG5 324 aaPredicted RBP23.51■■□□□ 1.35
VARS-221ENST00000463184 TMEM232C9JQI7 657 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 ADCY6O43306 1168 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 FOSL2P15408 326 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 STAT2P52630 851 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 TFAP4Q01664 338 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 GNASQ5JWF2 1037 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 PPP4R3BQ5MIZ7 849 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 MFSD5Q6N075 450 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 FAM160B2Q86V87 743 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 CCDC144CPQ8IYA2 1237 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 SEC62Q99442 399 aaKnown RBP23.51■■□□□ 1.35
VARS-221ENST00000463184 NAPBQ9H115 298 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 ACAD9Q9H845 621 aa23.51■■□□□ 1.35
VARS-221ENST00000463184 ARVCFO00192 962 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 NKX3-2P78367 333 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 PPARAQ07869 468 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 CCDC174Q6PII3 467 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 STAG1Q8WVM7 1258 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 GMCL1Q96IK5 515 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 HOMER2Q9NSB8 354 aa23.5■■□□□ 1.35
VARS-221ENST00000463184 CDH23Q9H251 3354 aa23.49■■□□□ 1.35
VARS-221ENST00000463184 PLA2G6O60733 806 aa23.49■■□□□ 1.35
VARS-221ENST00000463184 SLC1A4P43007 532 aa23.49■■□□□ 1.35
VARS-221ENST00000463184 IRX5P78411 483 aaPredicted RBP23.49■■□□□ 1.35
VARS-221ENST00000463184 PPIGQ13427 754 aaKnown RBP eCLIP23.49■■□□□ 1.353e-7■■□□□ 11.6
VARS-221ENST00000463184 TKFCQ3LXA3 575 aa23.49■■□□□ 1.35
VARS-221ENST00000463184 FAM133AQ8N9E0 248 aa23.49■■□□□ 1.35
VARS-221ENST00000463184 KATNBL1Q9H079 304 aa23.49■■□□□ 1.35
VARS-221ENST00000463184 ISY1Q9ULR0 285 aaKnown RBP23.49■■□□□ 1.35
VARS-221ENST00000463184 PRUNE2Q8WUY3 3088 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 ASB14A6NK59 587 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 DNAJB2P25686 324 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 CNTN2Q02246 1040 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 ZMYM1Q5SVZ6 1142 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 PI4K2BQ8TCG2 481 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.48■■□□□ 1.35
VARS-221ENST00000463184 FSD1Q9BTV5 496 aa23.48■■□□□ 1.35
VARS-221ENST00000463184 TLR3O15455 904 aaKnown RBP23.47■■□□□ 1.35
VARS-221ENST00000463184 TNFAIP2Q03169 654 aa23.47■■□□□ 1.35
VARS-221ENST00000463184 IKQ13123 557 aaPredicted RBP23.47■■□□□ 1.35
VARS-221ENST00000463184 TMEM199Q8N511 208 aa23.47■■□□□ 1.35
VARS-221ENST00000463184 AGBL1Q96MI9 1066 aa23.47■■□□□ 1.35
VARS-221ENST00000463184 A1CFQ9NQ94 594 aaKnown RBP23.47■■□□□ 1.35
VARS-221ENST00000463184 RNF146Q9NTX7 359 aa23.47■■□□□ 1.35
VARS-221ENST00000463184 ZNF536O15090 1300 aa23.47■■□□□ 1.35
VARS-221ENST00000463184 MCM3APO60318 1980 aa23.47■■□□□ 1.35
VARS-221ENST00000463184 CTAGE5O15320 804 aa23.46■■□□□ 1.35
VARS-221ENST00000463184 MCCP23508 829 aa23.46■■□□□ 1.35
VARS-221ENST00000463184 FAM126BQ8IXS8 530 aa23.46■■□□□ 1.35
VARS-221ENST00000463184 TRERF1Q96PN7 1200 aa23.46■■□□□ 1.35
VARS-221ENST00000463184 RRP1P56182 461 aaKnown RBP23.45■■□□□ 1.34
VARS-221ENST00000463184 GRIN2CQ14957 1233 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 TMEM240Q5SV17 173 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 RCSD1Q6JBY9 416 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 NOL8Q76FK4 1167 aaKnown RBP23.45■■□□□ 1.34
VARS-221ENST00000463184 C16orf59Q7L2K0 433 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 TIFAQ96CG3 184 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 ZNF576Q9H609 170 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 STX8Q9UNK0 236 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 GNEQ9Y223 722 aaKnown RBP23.45■■□□□ 1.34
VARS-221ENST00000463184 VCANP13611 3396 aa23.45■■□□□ 1.34
VARS-221ENST00000463184 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.44■■□□□ 1.34
VARS-221ENST00000463184 SOWAHBA6NEL2 793 aa23.44■■□□□ 1.34
VARS-221ENST00000463184 TSPY2A6NKD2 308 aa23.44■■□□□ 1.34
VARS-221ENST00000463184 CABYRO75952 493 aa23.44■■□□□ 1.34
VARS-221ENST00000463184 ALAS1P13196 640 aa23.44■■□□□ 1.34
VARS-221ENST00000463184 CCDC129Q6ZRS4 1044 aa23.44■■□□□ 1.34
VARS-221ENST00000463184 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.44■■□□□ 1.34
VARS-221ENST00000463184 CD4P01730 458 aa23.43■■□□□ 1.34
VARS-221ENST00000463184 CSF2RAP15509 400 aa23.43■■□□□ 1.34
VARS-221ENST00000463184 BEX3Q00994 111 aa23.43■■□□□ 1.34
VARS-221ENST00000463184 RASIP1Q5U651 963 aa23.43■■□□□ 1.34
VARS-221ENST00000463184 PSRC1Q6PGN9 363 aaPredicted RBP23.43■■□□□ 1.34
VARS-221ENST00000463184 KCTD1Q719H9 257 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms