RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 ADGRF4Q8IZF3 695 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 NPLOC4Q8TAT6 608 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 IVNS1ABPQ9Y6Y0 642 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 WDR19Q8NEZ3 1342 aa19.45■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CCDC69A6NI79 296 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CCDC85CA6NKD9 419 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PGK2P07205 417 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ALAS1P13196 640 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 RPS6KB1P23443 525 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ADORA2AP29274 412 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 GRK4P32298 578 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 LIFRP42702 1097 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 OAZ1P54368 228 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 Q6ZUG5 572 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SOCS4Q8WXH5 440 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 TRIB2Q92519 343 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ARMC5Q96C12 935 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 MMP19Q99542 508 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 UPF3BQ9BZI7 483 aaKnown RBP19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 JMJD4Q9H9V9 463 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 RNF146Q9NTX7 359 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 FLRT1Q9NZU1 646 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CCPG1Q9ULG6 757 aa19.44■□□□□ 0.7
HLA-DPA1-245ENST00000463066 DHX16O60231 1041 aaKnown RBP19.43■□□□□ 0.7
HLA-DPA1-245ENST00000463066 DDAH1O94760 285 aa19.43■□□□□ 0.7
HLA-DPA1-245ENST00000463066 FDX1P10109 184 aa19.43■□□□□ 0.7
HLA-DPA1-245ENST00000463066 RGS2P41220 211 aa19.43■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CDC37Q16543 378 aaPredicted RBP19.43■□□□□ 0.7
HLA-DPA1-245ENST00000463066 MUM1L1Q5H9M0 696 aa19.43■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CYTH3O43739 400 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PLEKHA8P1O95397 391 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ICAM1P05362 532 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 HMGB1P09429 215 aaKnown RBP19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 FCER1AP12319 257 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 APOBRQ0VD83 1088 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 MTFR1Q15390 333 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SGMS1Q86VZ5 419 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 MICU3Q86XE3 530 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CMTR1Q8N1G2 835 aaKnown RBP19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PIBF1Q8WXW3 757 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 BRF1Q92994 677 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ZNF333Q96JL9 665 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 APBA2Q99767 749 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 ZSWIM6Q9HCJ5 1215 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 BIN2Q9UBW5 565 aaPredicted RBP19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
HLA-DPA1-245ENST00000463066 KLF18A0A0U1RQI7 1052 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 INHAP05111 366 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 COPB2P35606 906 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 KCTD2Q14681 263 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 QRICH1Q2TAL8 776 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 APOA5Q6Q788 366 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 TMTC2Q8N394 836 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SLAIN1Q8ND83 568 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 TRERF1Q96PN7 1200 aa19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 LARP6Q9BRS8 491 aaKnown RBP19.41■□□□□ 0.7
HLA-DPA1-245ENST00000463066 STRNO43815 780 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PPP1R11O60927 126 aaPredicted RBP19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PSMA5P28066 241 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 SOX10P56693 466 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 USH1GQ495M9 461 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 RUFY3Q7L099 469 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 DPP9Q86TI2 863 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 CTCFLQ8NI51 663 aaPredicted RBP19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PXYLP1Q8TE99 480 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 PIGSQ96S52 555 aa19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 NAP1L2Q9ULW6 460 aaPredicted RBP19.4■□□□□ 0.7
HLA-DPA1-245ENST00000463066 NFIBO00712 420 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 HOXC6P09630 235 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 XRCC5P13010 732 aaKnown RBP19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FGD1P98174 961 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ABRAQ8N0Z2 381 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 SRBD1Q8N5C6 995 aaKnown RBP19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 MTMR8Q96EF0 704 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 PURBQ96QR8 312 aaKnown RBP19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 TM6SF1Q9BZW5 370 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 UNC93B1Q9H1C4 597 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ACAD9Q9H845 621 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 A1CFQ9NQ94 594 aaKnown RBP19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 HTTP42858 3142 aa19.39■□□□□ 0.69
HLA-DPA1-245ENST00000463066 TOB2Q14106 344 aaPredicted RBP19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ZNF792Q3KQV3 632 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 TKFCQ3LXA3 575 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ANKRD35Q8N283 1001 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 DDX11Q96FC9 970 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 FGD4Q96M96 766 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 MAP3K14Q99558 947 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 RIOX1Q9H6W3 641 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CYP46A1Q9Y6A2 500 aa19.38■□□□□ 0.69
HLA-DPA1-245ENST00000463066 DNAJC25-GNG10A0A024R161 153 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 hCG_1642624A0A1W2PR95 340 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 ZBTB43O43298 467 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 HMGCRP04035 888 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CYP2C19P33261 490 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 CNTN2Q02246 1040 aa19.37■□□□□ 0.69
HLA-DPA1-245ENST00000463066 NSMFQ6X4W1 530 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms