RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 PRDM5Q9NQX1 630 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 SAP30BPQ9UHR5 308 aaKnown RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 MYO9BQ13459 2157 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-212ENST00000463005 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-212ENST00000463005 CYP7A1P22680 504 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 ADORA2AP29274 412 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 ADCYAP1R1P41586 468 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 PTPN5P54829 565 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 LRRC41Q15345 812 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 TRIM60Q495X7 471 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 TNNI3KQ59H18 835 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 ABRAQ8N0Z2 381 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 MB21D1Q8N884 522 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 MOV10L1Q9BXT6 1211 aaKnown RBP9.67□□□□□ -0.86
GARNL3-212ENST00000463005 MROH8Q9H579 483 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 RPAP3Q9H6T3 665 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-212ENST00000463005 PDLIM7Q9NR12 457 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 NRBP1Q9UHY1 535 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 FPGT-TNNI3KV9GXZ4 949 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 DNAH12Q6ZR08 3092 aa9.67□□□□□ -0.86
GARNL3-212ENST00000463005 TRIM43BA6NCK2 446 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 IPO8O15397 1037 aaKnown RBP9.66□□□□□ -0.86
GARNL3-212ENST00000463005 RAG1P15918 1043 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 RARSP54136 660 aaKnown RBP9.66□□□□□ -0.86
GARNL3-212ENST00000463005 DYNLL1P63167 89 aaKnown RBP9.66□□□□□ -0.86
GARNL3-212ENST00000463005 TLE2Q04725 743 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 ACER1Q8TDN7 264 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 GLMNQ92990 594 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 TRIM43Q96BQ3 446 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-212ENST00000463005 RNPC3Q96LT9 517 aaKnown RBP9.66□□□□□ -0.86
GARNL3-212ENST00000463005 DBNDD2Q9BQY9 259 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 PRR14Q9BWN1 585 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 SPATC1LQ9H0A9 340 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 PLXNA1Q9UIW2 1896 aa9.66□□□□□ -0.86
GARNL3-212ENST00000463005 MYH8P13535 1937 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 PNMA6EA0A0J9YXQ4 647 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 TNFRSF10AO00220 468 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 KIAA0355O15063 1070 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 COBLO75128 1261 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 CLTBP09497 229 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 ERCC3P19447 782 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 ZAP70P43403 619 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 ANO1Q5XXA6 986 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 RNF180Q86T96 592 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 FTSJ3Q8IY81 847 aaKnown RBP9.65□□□□□ -0.86
GARNL3-212ENST00000463005 FAM160A2Q8N612 972 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-212ENST00000463005 FERMT2Q96AC1 680 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 TOX2Q96NM4 488 aa9.65□□□□□ -0.86
GARNL3-212ENST00000463005 SUPT16HQ9Y5B9 1047 aaKnown RBP9.65□□□□□ -0.86
GARNL3-212ENST00000463005 NR1I2O75469 434 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 BCAR3O75815 825 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 SLC25A27O95847 323 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 POLR3DP05423 398 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 RARBP10826 455 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 FCER1AP12319 257 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 GUCY1A2P33402 732 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 SHMT1P34896 483 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 FPGSQ05932 587 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 OS9Q13438 667 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 PRAMEF19Q5SWL8 479 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 ZKSCAN2Q63HK3 967 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 LYPD8Q6UX82 237 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 ATXN2LQ8WWM7 1075 aaKnown RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 MAML3Q96JK9 1138 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 TSEN34Q9BSV6 310 aaKnown RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 PRM3Q9NNZ6 103 aa9.64□□□□□ -0.87
GARNL3-212ENST00000463005 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 DIS3Q9Y2L1 958 aaKnown RBP9.64□□□□□ -0.87
GARNL3-212ENST00000463005 A0A0G2JMZ2 1700 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 DCDC2CA8MYV0 355 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
GARNL3-212ENST00000463005 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
GARNL3-212ENST00000463005 PLCD1P51178 756 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 RRP1P56182 461 aaKnown RBP9.63□□□□□ -0.87
GARNL3-212ENST00000463005 ATP8B2P98198 1209 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 GABPAQ06546 454 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 PLS1Q14651 629 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 GRIN2CQ14957 1233 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 SEPT2Q15019 361 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 FAM47AQ5JRC9 791 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 CCDC174Q6PII3 467 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 NCAPG2Q86XI2 1143 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 MIGA1Q8NAN2 632 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 SSH3Q8TE77 659 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 TANGO6Q9C0B7 1094 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 ZNF576Q9H609 170 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 XPNPEP3Q9NQH7 507 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 TMEM39AQ9NV64 488 aa9.63□□□□□ -0.87
GARNL3-212ENST00000463005 COL11A1P12107 1806 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms