RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 KRT82Q9NSB4 513 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 GTF2IRD1Q9UHL9 959 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 TRAK1Q9UPV9 953 aa4.23□□□□□ -1.73
CD46-210ENST00000462968 NHSQ6T4R5 1651 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 RGPD8O14715 1765 aaPredicted RBP4.22□□□□□ -1.73
CD46-210ENST00000462968 QSER1Q2KHR3 1735 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 IFT172Q9UG01 1749 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 TMEM88BA6NKF7 163 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 FZD6O60353 706 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 MMP10P09238 476 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 SRFP11831 508 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 DPEP1P16444 411 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 PTPN12Q05209 780 aaKnown RBP4.22□□□□□ -1.73
CD46-210ENST00000462968 HABP4Q5JVS0 413 aaKnown RBP4.22□□□□□ -1.73
CD46-210ENST00000462968 GJD3Q8N144 294 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 KCNH5Q8NCM2 988 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 CDK19Q9BWU1 502 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 NLRP2Q9NX02 1062 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 ANKRD36BQ8N2N9 1353 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 USP47Q96K76 1375 aa4.22□□□□□ -1.73
CD46-210ENST00000462968 ABCC6O95255 1503 aa4.21□□□□□ -1.73
CD46-210ENST00000462968 TRPM1Q7Z4N2 1603 aa4.21□□□□□ -1.73
CD46-210ENST00000462968 TNRC18O15417 2968 aaPredicted RBP4.21□□□□□ -1.74
CD46-210ENST00000462968 RASSF10A6NK89 507 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 KCNA3P22001 575 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 SSFA2P28290 1259 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 DEFB115Q30KQ5 88 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 DALRD3Q5D0E6 543 aaKnown RBP4.21□□□□□ -1.74
CD46-210ENST00000462968 RPS26P11Q5JNZ5 115 aaPredicted RBP4.21□□□□□ -1.74
CD46-210ENST00000462968 SMIM5Q71RC9 77 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 ZC3H12CQ9C0D7 883 aaKnown RBP4.21□□□□□ -1.74
CD46-210ENST00000462968 SEMA3GQ9NS98 782 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 KIF1BO60333 1816 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 CPSF1Q10570 1443 aaKnown RBP4.21□□□□□ -1.74
CD46-210ENST00000462968 SPATA31E1Q6ZUB1 1445 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 NSD3Q9BZ95 1437 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 PASKQ96RG2 1323 aa4.21□□□□□ -1.74
CD46-210ENST00000462968 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.74
CD46-210ENST00000462968 SYN1P17600 705 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 LMNB1P20700 586 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 ITGAEP38570 1179 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 NFKB2Q00653 900 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 GGNQ86UU5 652 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD46-210ENST00000462968 NLGN1Q8N2Q7 840 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 GTF3C2Q8WUA4 911 aaPredicted RBP4.2□□□□□ -1.74
CD46-210ENST00000462968 KCNC2Q96PR1 638 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 IRF2BPLQ9H1B7 796 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 ATP13A1Q9HD20 1204 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 CCDC87Q9NVE4 849 aa4.2□□□□□ -1.74
CD46-210ENST00000462968 PPLO60437 1756 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 NSD2O96028 1365 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 CA12O43570 354 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 EOMESO95936 686 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 GSTP1P09211 210 aaKnown RBP4.19□□□□□ -1.74
CD46-210ENST00000462968 SOX10P56693 466 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 ERVK-24P63145 666 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 FAAP100Q0VG06 881 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 MTMR3Q13615 1198 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 ZC3H12AQ5D1E8 599 aaKnown RBP4.19□□□□□ -1.74
CD46-210ENST00000462968 PDZD3Q86UT5 571 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 RNF214Q8ND24 703 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 KCNN1Q92952 543 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 ZCCHC4Q9H5U6 513 aa4.19□□□□□ -1.74
CD46-210ENST00000462968 AKAP12Q02952 1782 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 SLIT3O75094 1523 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.18□□□□□ -1.74
CD46-210ENST00000462968 GNAT3A8MTJ3 354 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 BMP7P18075 431 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 NTF4P34130 210 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 ECE1P42892 770 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 FXR1P51114 621 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD46-210ENST00000462968 TMF1P82094 1093 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 PRPF40BQ6NWY9 871 aaKnown RBP4.18□□□□□ -1.74
CD46-210ENST00000462968 LDHDQ86WU2 507 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 NPAS4Q8IUM7 802 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 SLC17A8Q8NDX2 589 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 CCDC120Q96HB5 630 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 GPR101Q96P66 508 aaPredicted RBP4.18□□□□□ -1.74
CD46-210ENST00000462968 ABCB6Q9NP58 842 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 SSU72Q9NP77 194 aaKnown RBP4.18□□□□□ -1.74
CD46-210ENST00000462968 RTEL1Q9NZ71 1219 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 TNRC6CQ9HCJ0 1690 aaKnown RBP4.18□□□□□ -1.74
CD46-210ENST00000462968 KDM6AO15550 1401 aaPredicted RBP4.18□□□□□ -1.74
CD46-210ENST00000462968 BTAF1O14981 1849 aa4.18□□□□□ -1.74
CD46-210ENST00000462968 COL18A1P39060 1754 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 PALLDQ8WX93 1383 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 IQCA1LA6NCM1 817 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 MAP2K2P36507 400 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 HNRNPUQ00839 825 aaKnown RBP eCLIP4.17□□□□□ -1.74
CD46-210ENST00000462968 NFIXQ14938 502 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 SKOR2Q2VWA4 1001 aaPredicted RBP4.17□□□□□ -1.74
CD46-210ENST00000462968 USPL1Q5W0Q7 1092 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 CXorf38Q8TB03 319 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 ABHD4Q8TB40 342 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 ZCRB1Q8TBF4 217 aaKnown RBP4.17□□□□□ -1.74
CD46-210ENST00000462968 SMARCC1Q92922 1105 aaPredicted RBP4.17□□□□□ -1.74
CD46-210ENST00000462968 HSPA12BQ96MM6 686 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 EHD4Q9H223 541 aa4.17□□□□□ -1.74
CD46-210ENST00000462968 ABT1Q9ULW3 272 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms