RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 SHPRHQ149N8 1683 aa9.63□□□□□ -0.87
UBE4B-204ENST00000462658 UPK3BL1B0FP48 263 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 UPK3BL2E5RIL1 263 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 ITGB7P26010 798 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 GJA8P48165 433 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 ZAR1Q86SH2 424 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 KCT2Q8NC54 265 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 GINM1Q9NU53 330 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 INSRP06213 1382 aa9.62□□□□□ -0.87
UBE4B-204ENST00000462658 KIF20BQ96Q89 1820 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 FAM170BA6NMN3 283 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 DNAJA2O60884 412 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 LEFTY1O75610 366 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 F13BP05160 661 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 FBLN1P23142 703 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 ARMCX6Q7L4S7 300 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 SHKBP1Q8TBC3 707 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 XAGE3Q8WTP9 111 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 DBNDD2Q9BQY9 259 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 EFR3BQ9Y2G0 817 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
UBE4B-204ENST00000462658 ANKRD26Q9UPS8 1709 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 WDR64B1ANS9 1081 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 K7ELQ4 463 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-204ENST00000462658 ZNF165P49910 485 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 PRAMEF13Q5VWM6 474 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 TOP6BLQ8N6T0 577 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 FOXQ1Q9C009 403 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 KLHL3Q9UH77 587 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 ADAM30Q9UKF2 790 aa9.6□□□□□ -0.87
UBE4B-204ENST00000462658 ZBED9Q6R2W3 1325 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 NRKQ7Z2Y5 1582 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 OVOS2A0A0J9YW53 1432 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 OVOS2Q6IE36 1432 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 CHURC1-FNTBB4DL54 471 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 RBAK-RBAKDNI3L0D1 243 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-204ENST00000462658 FAM87AP0C7U9 286 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 TMEM201Q5SNT2 666 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 KRT28Q7Z3Y7 464 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 MCATQ8IVS2 390 aaKnown RBP9.59□□□□□ -0.87
UBE4B-204ENST00000462658 MRPL41Q8IXM3 137 aaKnown RBP9.59□□□□□ -0.87
UBE4B-204ENST00000462658 RASGRP4Q8TDF6 673 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 TINF2Q9BSI4 451 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 ANTXR1Q9H6X2 564 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 EHMT1Q9H9B1 1298 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 PPT2Q9UMR5 302 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 NUDCQ9Y266 331 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 PXDNQ92626 1479 aa9.59□□□□□ -0.87
UBE4B-204ENST00000462658 LRIG2O94898 1065 aa9.58□□□□□ -0.88
UBE4B-204ENST00000462658 ATE1O95260 518 aa9.58□□□□□ -0.88
UBE4B-204ENST00000462658 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
UBE4B-204ENST00000462658 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
UBE4B-204ENST00000462658 SLC6A19Q695T7 634 aa9.58□□□□□ -0.88
UBE4B-204ENST00000462658 ZNF765Q7L2R6 523 aa9.58□□□□□ -0.88
UBE4B-204ENST00000462658 REXO1Q8N1G1 1221 aaKnown RBP9.58□□□□□ -0.88
UBE4B-204ENST00000462658 FAM13CQ8NE31 585 aa9.58□□□□□ -0.88
UBE4B-204ENST00000462658 PNPLA6Q8IY17 1366 aa9.58□□□□□ -0.88
UBE4B-204ENST00000462658 BLMP54132 1417 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-204ENST00000462658 GSC2O15499 205 aa9.57□□□□□ -0.88
UBE4B-204ENST00000462658 DIAPH1O60610 1272 aaKnown RBP9.57□□□□□ -0.88
UBE4B-204ENST00000462658 CAP2P40123 477 aa9.57□□□□□ -0.88
UBE4B-204ENST00000462658 CCDC81Q6ZN84 652 aa9.57□□□□□ -0.88
UBE4B-204ENST00000462658 DUSP23Q9BVJ7 150 aa9.57□□□□□ -0.88
UBE4B-204ENST00000462658 PRDM10Q9NQV6 1147 aa9.57□□□□□ -0.88
UBE4B-204ENST00000462658 JCADQ9P266 1359 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 SLC22A31A6NKX4 558 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 U2SURPO15042 1029 aaKnown RBP9.56□□□□□ -0.88
UBE4B-204ENST00000462658 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-204ENST00000462658 NASPP49321 788 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-204ENST00000462658 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBE4B-204ENST00000462658 FBXW10Q5XX13 1052 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 OGFOD3Q6PK18 319 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 ZDHHC13Q8IUH4 622 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 CCDC146Q8IYE0 955 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 RIN3Q8TB24 985 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 FERD3LQ96RJ6 166 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 MIPEPQ99797 713 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 TRPM3Q9HCF6 1732 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-204ENST00000462658 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-204ENST00000462658 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
UBE4B-204ENST00000462658 KIF1AQ12756 1690 aa9.55□□□□□ -0.88
UBE4B-204ENST00000462658 ADAM23O75077 832 aa9.55□□□□□ -0.88
UBE4B-204ENST00000462658 SLITRK5O94991 958 aa9.55□□□□□ -0.88
UBE4B-204ENST00000462658 OSBPL1AQ9BXW6 950 aa9.55□□□□□ -0.88
UBE4B-204ENST00000462658 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
UBE4B-204ENST00000462658 SMG6Q86US8 1419 aaKnown RBP9.55□□□□□ -0.88
UBE4B-204ENST00000462658 MAP3K19Q56UN5 1328 aa9.55□□□□□ -0.88
UBE4B-204ENST00000462658 COL3A1P02461 1466 aaPredicted RBP9.54□□□□□ -0.88
UBE4B-204ENST00000462658 ABCA3Q99758 1704 aa9.54□□□□□ -0.88
UBE4B-204ENST00000462658 IL13P35225 146 aa9.54□□□□□ -0.88
UBE4B-204ENST00000462658 SOX9P48436 509 aa9.54□□□□□ -0.88
UBE4B-204ENST00000462658 ARSHQ5FYA8 562 aa9.54□□□□□ -0.88
UBE4B-204ENST00000462658 OVOS1Q6IE37 1185 aa9.54□□□□□ -0.88
UBE4B-204ENST00000462658 MFSD2AQ8NA29 543 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms