RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 PCSK2P16519 638 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 EPHA1P21709 976 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 TNIP1Q15025 636 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 HLFQ16534 295 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 MTHFSDQ2M296 383 aaKnown RBP7.16□□□□□ -1.26
SPTA1-202ENST00000461624 KIAA1211Q6ZU35 1233 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 MOB2Q70IA6 237 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 TTC5Q8N0Z6 440 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 ARMC10Q8N2F6 343 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 SEC31BQ9NQW1 1179 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 KCNK4Q9NYG8 393 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 PTPN22Q9Y2R2 807 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 TRIM17Q9Y577 477 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 RTL9Q8NET4 1388 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 CEMIPQ8WUJ3 1361 aa7.16□□□□□ -1.26
SPTA1-202ENST00000461624 PSME4Q14997 1843 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 PRAMEF22A3QJZ6 481 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 H3BRJ5 948 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 KCNQ3O43525 872 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 DUOXA2Q1HG44 320 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 GLYCTKQ8IVS8 523 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 IL17REQ8NFR9 667 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 RPGRQ92834 1020 aaKnown RBP7.15□□□□□ -1.26
SPTA1-202ENST00000461624 UTP4Q969X6 686 aaKnown RBP7.15□□□□□ -1.26
SPTA1-202ENST00000461624 DCPSQ96C86 337 aaKnown RBP7.15□□□□□ -1.26
SPTA1-202ENST00000461624 FAM46AQ96IP4 442 aaKnown RBP7.15□□□□□ -1.26
SPTA1-202ENST00000461624 FMNL2Q96PY5 1086 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 GGA3Q9NZ52 723 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 SALL4Q9UJQ4 1053 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 GNEQ9Y223 722 aaKnown RBP7.15□□□□□ -1.26
SPTA1-202ENST00000461624 USP16Q9Y5T5 823 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 UBN2Q6ZU65 1347 aa7.15□□□□□ -1.26
SPTA1-202ENST00000461624 ZNF646O15015 1829 aaPredicted RBP7.15□□□□□ -1.27
SPTA1-202ENST00000461624 A0A1W2PPC1 479 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 SSC5DA1L4H1 1573 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 PSMD14O00487 310 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 ABCC4O15439 1325 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 AAMPQ13685 434 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 UBE2Q1Q7Z7E8 422 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 TTC16Q8NEE8 873 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 SUPT20HQ8NEM7 779 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-202ENST00000461624 MYRFLQ96LU7 910 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 POP1Q99575 1024 aaKnown RBP7.14□□□□□ -1.27
SPTA1-202ENST00000461624 OSGEPQ9NPF4 335 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 KANSL3Q9P2N6 904 aa7.14□□□□□ -1.27
SPTA1-202ENST00000461624 KIAA1324LA8MWY0 1029 aaPredicted RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 H3BRB1 525 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 TCERG1O14776 1098 aaKnown RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 ICMTO60725 284 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 NTSR2O95665 410 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 MPSTP25325 297 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 RPS12P25398 132 aaKnown RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 SSTR4P31391 388 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 SERPINB4P48594 390 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 ZNF211Q13398 564 aaPredicted RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 KIF4BQ2VIQ3 1234 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 ANKRD34AQ69YU3 496 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 ATCAYQ86WG3 371 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 PMEPA1Q969W9 287 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 SHISA4Q96DD7 197 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 RBM17Q96I25 401 aaKnown RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 NYXQ9GZU5 481 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 TUT1Q9H6E5 874 aaKnown RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
SPTA1-202ENST00000461624 PODXL2Q9NZ53 605 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 STXBP5LQ9Y2K9 1186 aa7.13□□□□□ -1.27
SPTA1-202ENST00000461624 COL4A1P02462 1669 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 UBE2Q2LH0YL09 131 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 ADAM11O75078 769 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 COBLO75128 1261 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 PDGFAP04085 211 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 NPR3P17342 541 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 CES1P23141 567 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 MZF1P28698 734 aaPredicted RBP7.12□□□□□ -1.27
SPTA1-202ENST00000461624 CDC25BP30305 580 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 EIF1AXP47813 144 aaKnown RBP7.12□□□□□ -1.27
SPTA1-202ENST00000461624 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
SPTA1-202ENST00000461624 SREBF2Q12772 1141 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 NFIAQ12857 509 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 MCTP1Q6DN14 999 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 DPP8Q6V1X1 898 aaPredicted RBP7.12□□□□□ -1.27
SPTA1-202ENST00000461624 NPM2Q86SE8 214 aaKnown RBP7.12□□□□□ -1.27
SPTA1-202ENST00000461624 SP8Q8IXZ3 490 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 UBASH3BQ8TF42 649 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 EDEM1Q92611 657 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 KLHDC7BQ96G42 594 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 C7orf69Q9H7B7 122 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 ANO2Q9NQ90 1003 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 KCNQ5Q9NR82 932 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 DZANK1Q9NVP4 752 aa7.12□□□□□ -1.27
SPTA1-202ENST00000461624 ZSWIM8A7E2V4 1837 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 ERVV-1B6SEH8 477 aa7.11□□□□□ -1.27
SPTA1-202ENST00000461624 PDE2AO00408 941 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-202ENST00000461624 IGF2BP3O00425 579 aaKnown RBP eCLIP7.11□□□□□ -1.27
SPTA1-202ENST00000461624 DNM1Q05193 864 aaKnown RBP7.11□□□□□ -1.27
SPTA1-202ENST00000461624 MTMR3Q13615 1198 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms