RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 ANKRD35Q8N283 1001 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 HERVK_113Q902F9 699 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 FGD4Q96M96 766 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
PABPC4-208ENST00000461578 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
PABPC4-208ENST00000461578 ABHD16BQ9H3Z7 469 aa16.51■□□□□ 0.23
PABPC4-208ENST00000461578 ZBED4O75132 1171 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 NDUFB10O96000 172 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 CCL23P55773 120 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
PABPC4-208ENST00000461578 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
PABPC4-208ENST00000461578 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
PABPC4-208ENST00000461578 KIFC2Q96AC6 838 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 FAM122AQ96E09 287 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 KIF1BPQ96EK5 621 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.5■□□□□ 0.232e-14■■■□□ 15.3
PABPC4-208ENST00000461578 MTIF3Q9H2K0 278 aaKnown RBP16.5■□□□□ 0.23
PABPC4-208ENST00000461578 HIPK3Q9H422 1215 aa16.5■□□□□ 0.23
PABPC4-208ENST00000461578 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
PABPC4-208ENST00000461578 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
PABPC4-208ENST00000461578 F5H6K3 240 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 CTAGE5O15320 804 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 CD4P01730 458 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 MYOGP15173 224 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 KLRC3Q07444 240 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 MYH7P12883 1935 aa16.49■□□□□ 0.23
PABPC4-208ENST00000461578 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 RASA1P20936 1047 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 PTGS1P23219 599 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 TFF2Q03403 129 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 PPP2R2DQ66LE6 453 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
PABPC4-208ENST00000461578 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
PABPC4-208ENST00000461578 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
PABPC4-208ENST00000461578 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 ATP2A1O14983 1001 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 SKIV2LQ15477 1246 aaKnown RBP16.47■□□□□ 0.23
PABPC4-208ENST00000461578 KATNBL1Q9H079 304 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 MKNK2Q9HBH9 465 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
PABPC4-208ENST00000461578 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
PABPC4-208ENST00000461578 ASTN1O14525 1302 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 CHD7Q9P2D1 2997 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 KCNQ1P51787 676 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 TLK2Q86UE8 772 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 CHST13Q8NET6 341 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 TRPV6Q9H1D0 765 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
PABPC4-208ENST00000461578 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.23
PABPC4-208ENST00000461578 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
PABPC4-208ENST00000461578 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 BMP1P13497 986 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 ATP5JP18859 108 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 PSMC6P62333 389 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
PABPC4-208ENST00000461578 LRRC47Q8N1G4 583 aaKnown RBP16.45■□□□□ 0.22
PABPC4-208ENST00000461578 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 CHMP4CQ96CF2 233 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 SCLYQ96I15 445 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 HAUS7Q99871 368 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 NOC4LQ9BVI4 516 aaKnown RBP16.45■□□□□ 0.22
PABPC4-208ENST00000461578 WNT8AQ9H1J5 351 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 SLC4A7Q9Y6M7 1214 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 REV3LO60673 3130 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 NCOR1O75376 2440 aa16.45■□□□□ 0.22
PABPC4-208ENST00000461578 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
PABPC4-208ENST00000461578 RFXAPO00287 272 aa16.44■□□□□ 0.22
PABPC4-208ENST00000461578 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-208ENST00000461578 B4GALT4O60513 344 aa16.44■□□□□ 0.22
PABPC4-208ENST00000461578 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
PABPC4-208ENST00000461578 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
PABPC4-208ENST00000461578 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
PABPC4-208ENST00000461578 GRIN2DO15399 1336 aa16.44■□□□□ 0.22
PABPC4-208ENST00000461578 PRDM1O75626 825 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 CABYRO75952 493 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 NKX3-2P78367 333 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 ZSCAN25Q6NSZ9 544 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 C1QTNF1Q9BXJ1 281 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 AP5M1Q9H0R1 490 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 CERS4Q9HA82 394 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 PCDHA11Q9Y5I1 949 aa16.43■□□□□ 0.22
PABPC4-208ENST00000461578 LRRC37A2A6NM11 1700 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 BDP1A6H8Y1 2624 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 GSG1L2A8MUP6 293 aa16.42■□□□□ 0.22
PABPC4-208ENST00000461578 ZEB2O60315 1214 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms