RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SLC34A2O95436 690 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 COL6A1P12109 1028 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 TRDNQ13061 729 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 CCDC178Q5BJE1 867 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 TTC14Q96N46 770 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 UBAC1Q9BSL1 405 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 NRBP1Q9UHY1 535 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
VARS-219ENST00000461328 PLXNA1Q9UIW2 1896 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 DNAJC25-GNG10A0A024R161 153 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 DNM1LO00429 736 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 MYCNP04198 464 aaPredicted RBP18.06■□□□□ 0.48
VARS-219ENST00000461328 SNAP25P60880 206 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 CCDC174Q6PII3 467 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 CASC1Q6TDU7 716 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 ARRDC4Q8NCT1 418 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 AGBL1Q96MI9 1066 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 CNPY2Q9Y2B0 182 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 CEP290O15078 2479 aa18.06■□□□□ 0.48
VARS-219ENST00000461328 ZNF536O15090 1300 aa18.05■□□□□ 0.48
VARS-219ENST00000461328 SLC16A2P36021 539 aa18.05■□□□□ 0.48
VARS-219ENST00000461328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.05■□□□□ 0.48
VARS-219ENST00000461328 RALYLQ86SE5 291 aaKnown RBP18.05■□□□□ 0.48
VARS-219ENST00000461328 MSL3Q8N5Y2 521 aaKnown RBP18.05■□□□□ 0.48
VARS-219ENST00000461328 ZSCAN10Q96SZ4 725 aaPredicted RBP18.05■□□□□ 0.48
VARS-219ENST00000461328 SENP6Q9GZR1 1112 aaPredicted RBP18.05■□□□□ 0.48
VARS-219ENST00000461328 ACAD9Q9H845 621 aa18.05■□□□□ 0.48
VARS-219ENST00000461328 KAT14Q9H8E8 782 aa18.05■□□□□ 0.48
VARS-219ENST00000461328 RNF146Q9NTX7 359 aa18.05■□□□□ 0.48
VARS-219ENST00000461328 ALPK3Q96L96 1907 aa18.05■□□□□ 0.48
VARS-219ENST00000461328 TNKSO95271 1327 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 CYP21A2P08686 494 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 PDHBP11177 359 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 ALAS1P13196 640 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 TKFCQ3LXA3 575 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 GJC2Q5T442 439 aaPredicted RBP18.04■□□□□ 0.48
VARS-219ENST00000461328 SYDE2Q5VT97 1194 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 DGKHQ86XP1 1220 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 ESYT1Q9BSJ8 1104 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 ANO2Q9NQ90 1003 aa18.04■□□□□ 0.48
VARS-219ENST00000461328 ZMYND8Q9ULU4 1186 aaPredicted RBP18.04■□□□□ 0.48
VARS-219ENST00000461328 RBM8AQ9Y5S9 174 aaKnown RBP18.04■□□□□ 0.48
VARS-219ENST00000461328 SYNGAP1Q96PV0 1343 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 KBTBD13C9JR72 458 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 RARBP10826 455 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 TAL1P17542 331 aaPredicted RBP18.03■□□□□ 0.48
VARS-219ENST00000461328 LRRC26Q2I0M4 334 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 ZNF467Q7Z7K2 595 aaPredicted RBP18.03■□□□□ 0.48
VARS-219ENST00000461328 PNMA1Q8ND90 353 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 TRERF1Q96PN7 1200 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 ZSWIM5Q9P217 1185 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 ZHX1Q9UKY1 873 aaPredicted RBP18.03■□□□□ 0.48
VARS-219ENST00000461328 CCPG1Q9ULG6 757 aa18.03■□□□□ 0.48
VARS-219ENST00000461328 POTEB2H3BUK9 544 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 CDC45O75419 566 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 ZNF865P0CJ78 1059 aaPredicted RBP18.02■□□□□ 0.48
VARS-219ENST00000461328 AKR1A1P14550 325 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 IFIT1BQ5T764 474 aaKnown RBP18.02■□□□□ 0.48
VARS-219ENST00000461328 MAMDC4Q6UXC1 1216 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 BTNL9Q6UXG8 535 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 ENAHQ8N8S7 591 aaPredicted RBP18.02■□□□□ 0.48
VARS-219ENST00000461328 MAP4K1Q92918 833 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.48
VARS-219ENST00000461328 A1CFQ9NQ94 594 aaKnown RBP18.02■□□□□ 0.48
VARS-219ENST00000461328 XPNPEP3Q9NQH7 507 aa18.02■□□□□ 0.48
VARS-219ENST00000461328 RBM27Q9P2N5 1060 aaKnown RBP18.02■□□□□ 0.48
VARS-219ENST00000461328 SNAI1O95863 264 aaPredicted RBP18.01■□□□□ 0.47
VARS-219ENST00000461328 ICAM1P05362 532 aa18.01■□□□□ 0.47
VARS-219ENST00000461328 ATN1P54259 1190 aaPredicted RBP18.01■□□□□ 0.47
VARS-219ENST00000461328 ZNF543Q08ER8 600 aa18.01■□□□□ 0.47
VARS-219ENST00000461328 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
VARS-219ENST00000461328 FGD4Q96M96 766 aa18.01■□□□□ 0.47
VARS-219ENST00000461328 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.01■□□□□ 0.47
VARS-219ENST00000461328 ERICH2A1L162 156 aa18■□□□□ 0.47
VARS-219ENST00000461328 E7EWF7 191 aa18■□□□□ 0.47
VARS-219ENST00000461328 SNHG28P0DPA3 235 aa18■□□□□ 0.47
VARS-219ENST00000461328 SYN1P17600 705 aa18■□□□□ 0.47
VARS-219ENST00000461328 CNTN2Q02246 1040 aa18■□□□□ 0.47
VARS-219ENST00000461328 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
VARS-219ENST00000461328 LRRC41Q15345 812 aa18■□□□□ 0.47
VARS-219ENST00000461328 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
VARS-219ENST00000461328 GPATCH4Q5T3I0 446 aaKnown RBP18■□□□□ 0.47
VARS-219ENST00000461328 CYB5R4Q7L1T6 521 aa18■□□□□ 0.47
VARS-219ENST00000461328 LSG1Q9H089 658 aaKnown RBP18■□□□□ 0.47
VARS-219ENST00000461328 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
VARS-219ENST00000461328 IFIT3O14879 490 aaKnown RBP17.99■□□□□ 0.47
VARS-219ENST00000461328 PGK1P00558 417 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 GOLGA8HP0CJ92 632 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 ACVR2BQ13705 512 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 NSMFQ6X4W1 530 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 ARMCX2Q7L311 632 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 RNF180Q86T96 592 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 FAM133AQ8N9E0 248 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 LENG1Q96BZ8 264 aaPredicted RBP17.99■□□□□ 0.47
VARS-219ENST00000461328 PRO3102Q9H379 93 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 ABHD16BQ9H3Z7 469 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 PPP4R2Q9NY27 417 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 PNMA2Q9UL42 364 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms