RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 KRT86O43790 486 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 ATP1A1P05023 1023 aaKnown RBP13.56□□□□□ -0.24
GCOM1-203ENST00000460962 MYL1P05976 194 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 CYLC1P35663 651 aaPredicted RBP13.56□□□□□ -0.24
GCOM1-203ENST00000460962 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 TFR2Q9UP52 801 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 LRRIQ3A6PVS8 624 aaPredicted RBP13.56□□□□□ -0.24
GCOM1-203ENST00000460962 B4DLN1 442 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 ADAMTS2O95450 1211 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 MCM3P25205 808 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 CSGALNACT2Q8N6G5 542 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 PNMA1Q8ND90 353 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 JAKMIP2Q96AA8 810 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 MED4Q9NPJ6 270 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
GCOM1-203ENST00000460962 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 USP14P54578 494 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 INF2Q27J81 1249 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 MAP9Q49MG5 647 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 FBXO33Q7Z6M2 555 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 MMS19Q96T76 1030 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 TUBGCP2Q9BSJ2 902 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 TMEM60Q9H2L4 133 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 KLRC4O43908 158 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 GTF2E1P29083 439 aaPredicted RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 PRDX5P30044 214 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 TNNT3P45378 269 aaPredicted RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 TFAP4Q01664 338 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 SBK1Q52WX2 424 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 SRGAP2O75044 1071 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 SRGNP10124 158 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 KLRK1P26718 216 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 CKAP4Q07065 602 aaKnown RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 MEA1Q16626 185 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 PAPD7Q5XG87 772 aaKnown RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 TTI2Q6NXR4 508 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 CCDC47Q96A33 483 aaKnown RBP13.55□□□□□ -0.24
GCOM1-203ENST00000460962 AGPAT5Q9NUQ2 364 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 KBTBD4Q9NVX7 518 aa13.55□□□□□ -0.24
GCOM1-203ENST00000460962 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
GCOM1-203ENST00000460962 TAF1P21675 1872 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 IVLP07476 585 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 EEF2KMTQ96G04 330 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
GCOM1-203ENST00000460962 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 NUP58Q9BVL2 599 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 CCSER1Q9C0I3 900 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 FEZ2Q9UHY8 353 aaPredicted RBP13.54□□□□□ -0.24
GCOM1-203ENST00000460962 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 GNAQP50148 359 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 TFCP2L1Q9NZI6 479 aa13.54□□□□□ -0.24
GCOM1-203ENST00000460962 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
GCOM1-203ENST00000460962 USP17L8P0C7I0 530 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 HIBADHP31937 336 aaKnown RBP13.53□□□□□ -0.24
GCOM1-203ENST00000460962 ZNF662Q6ZS27 426 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 VIPAS39Q9H9C1 493 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 LAMB1P07942 1786 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 BICDL2A1A5D9 508 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 LAD1O00515 517 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 MTIF2P46199 727 aaKnown RBP13.53□□□□□ -0.24
GCOM1-203ENST00000460962 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
GCOM1-203ENST00000460962 FAM204AQ9H8W3 233 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 NHEJ1Q9H9Q4 299 aaPredicted RBP13.53□□□□□ -0.24
GCOM1-203ENST00000460962 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 RREB1Q92766 1687 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 M0R2N6 131 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 ZBED6P86452 979 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 PDE4DQ08499 809 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 DDB1Q16531 1140 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 CLEC4GQ6UXB4 293 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 BICDL1Q6ZP65 573 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 FAM114A1Q8IWE2 563 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 CCDC170Q8IYT3 715 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 P2RX5Q93086 422 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 CNOT6LQ96LI5 555 aaKnown RBP13.53□□□□□ -0.24
GCOM1-203ENST00000460962 TTYH3Q9C0H2 523 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 LACRTQ9GZZ8 138 aa13.53□□□□□ -0.24
GCOM1-203ENST00000460962 CUEDC2Q9H467 287 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms