RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 NKX3-2P78367 333 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.53
YIPF3-206ENST00000460903 FAM83BQ5T0W9 1011 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
YIPF3-206ENST00000460903 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 ABHD16BQ9H3Z7 469 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 SPC25Q9HBM1 224 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 SWAP70Q9UH65 585 aa18.39■□□□□ 0.53
YIPF3-206ENST00000460903 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 GTPBP6O43824 516 aaPredicted RBP18.38■□□□□ 0.53
YIPF3-206ENST00000460903 B4GALT4O60513 344 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
YIPF3-206ENST00000460903 SNRNP48Q6IEG0 339 aaKnown RBP18.38■□□□□ 0.53
YIPF3-206ENST00000460903 TMED8Q6PL24 325 aaPredicted RBP18.38■□□□□ 0.53
YIPF3-206ENST00000460903 CXCL17Q6UXB2 119 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 SCLYQ96I15 445 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 TEX13BQ9BXU2 312 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 TRPV6Q9H1D0 765 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 TRIOO75962 3097 aa18.38■□□□□ 0.53
YIPF3-206ENST00000460903 SCN10AQ9Y5Y9 1956 aa18.37■□□□□ 0.53
YIPF3-206ENST00000460903 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
YIPF3-206ENST00000460903 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
YIPF3-206ENST00000460903 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
YIPF3-206ENST00000460903 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
YIPF3-206ENST00000460903 LCORLQ8N3X6 602 aa18.37■□□□□ 0.53
YIPF3-206ENST00000460903 HLA-CQ95604 372 aa18.37■□□□□ 0.53
YIPF3-206ENST00000460903 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
YIPF3-206ENST00000460903 PTGS1P23219 599 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 MRE11P49959 708 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 ITGA7Q13683 1181 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 ATG2AQ2TAZ0 1938 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 ARMCX2Q7L311 632 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 SNX27Q96L92 541 aa18.36■□□□□ 0.53
YIPF3-206ENST00000460903 NUP88Q99567 741 aaPredicted RBP18.36■□□□□ 0.53
YIPF3-206ENST00000460903 CYP2D7A0A087X1C5 515 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 BCAR3O75815 825 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 TRIM27P14373 513 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 PDE6AP16499 860 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 TAP1Q03518 808 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 SPRED2Q7Z698 418 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 RPUSD2Q8IZ73 545 aaKnown RBP18.35■□□□□ 0.53
YIPF3-206ENST00000460903 C5orf42Q9H799 3197 aa18.35■□□□□ 0.53
YIPF3-206ENST00000460903 ZNF532Q9HCE3 1301 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 PRR33A8MZF0 331 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 LPXNO60711 386 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 CDK8P49336 464 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 SLC9C2Q5TAH2 1124 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.34■□□□□ 0.53
YIPF3-206ENST00000460903 ARNTL2Q8WYA1 636 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 CCDC17Q96LX7 622 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 GOPCQ9HD26 462 aa18.34■□□□□ 0.53
YIPF3-206ENST00000460903 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
YIPF3-206ENST00000460903 PRKAB2O43741 272 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 RAD21O60216 631 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 SLC4A3P48751 1232 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 PSMC6P62333 389 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 ATP8B2P98198 1209 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 GRB10Q13322 594 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 CPXCR1Q8N123 301 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 GNEQ9Y223 722 aaKnown RBP18.33■□□□□ 0.52
YIPF3-206ENST00000460903 USP34Q70CQ2 3546 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 NLRC5Q86WI3 1866 aa18.33■□□□□ 0.52
YIPF3-206ENST00000460903 ATP2A1O14983 1001 aa18.32■□□□□ 0.52
YIPF3-206ENST00000460903 CABYRO75952 493 aa18.32■□□□□ 0.52
YIPF3-206ENST00000460903 TNFAIP2Q03169 654 aa18.32■□□□□ 0.52
YIPF3-206ENST00000460903 TLK2Q86UE8 772 aa18.32■□□□□ 0.52
YIPF3-206ENST00000460903 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
YIPF3-206ENST00000460903 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
YIPF3-206ENST00000460903 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
YIPF3-206ENST00000460903 CNTN2Q02246 1040 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 FSCN1Q16658 493 aaKnown RBP18.31■□□□□ 0.52
YIPF3-206ENST00000460903 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 C12orf60Q5U649 245 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 C16orf86Q6ZW13 317 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 CLUAP1Q96AJ1 413 aa18.31■□□□□ 0.52
YIPF3-206ENST00000460903 PFKMP08237 780 aa18.3■□□□□ 0.52
YIPF3-206ENST00000460903 NHLH1Q02575 133 aa18.3■□□□□ 0.52
YIPF3-206ENST00000460903 TMEM63BQ5T3F8 832 aa18.3■□□□□ 0.52
YIPF3-206ENST00000460903 SLC9A7Q96T83 725 aa18.3■□□□□ 0.52
YIPF3-206ENST00000460903 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
YIPF3-206ENST00000460903 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
YIPF3-206ENST00000460903 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
YIPF3-206ENST00000460903 CYP2C9P11712 490 aa18.29■□□□□ 0.52
YIPF3-206ENST00000460903 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
YIPF3-206ENST00000460903 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
YIPF3-206ENST00000460903 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
YIPF3-206ENST00000460903 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
YIPF3-206ENST00000460903 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
YIPF3-206ENST00000460903 USP17L21D6R901 530 aa18.28■□□□□ 0.52
YIPF3-206ENST00000460903 NDUFB10O96000 172 aa18.28■□□□□ 0.52
YIPF3-206ENST00000460903 SMPD1P17405 629 aa18.28■□□□□ 0.52
YIPF3-206ENST00000460903 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms