RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 RBM8AQ9Y5S9 174 aaKnown RBP11.16□□□□□ -0.62
COL6A2-207ENST00000460886 PLIN4Q96Q06 1357 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 SYNGAP1Q96PV0 1343 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 F5H6K3 240 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 DLL1O00548 723 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 ADAMTS4O75173 837 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 PGK2P07205 417 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 RARBP10826 455 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.62
COL6A2-207ENST00000460886 ADCYAP1R1P41586 468 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 KLRC3Q07444 240 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF467Q7Z7K2 595 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-207ENST00000460886 PRPF38AQ8NAV1 312 aaKnown RBP11.15□□□□□ -0.62
COL6A2-207ENST00000460886 NEDD1Q8NHV4 660 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 CEP95Q96GE4 821 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 SLF1Q9BQI6 1058 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 XPNPEP3Q9NQH7 507 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.62
COL6A2-207ENST00000460886 NEDD4P46934 1319 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 NDUFB10O96000 172 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 AKR1A1P14550 325 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 TAL1P17542 331 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-207ENST00000460886 CCSAPQ6IQ19 270 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-207ENST00000460886 RNF180Q86T96 592 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
COL6A2-207ENST00000460886 MTMR4Q9NYA4 1195 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 CLIP2Q9UDT6 1046 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 VCANP13611 3396 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 LAMA4Q16363 1823 aa11.14□□□□□ -0.63
COL6A2-207ENST00000460886 A0A1W2PQ45 241 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 A0A1W2PQY0 241 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 TRIM43BA6NCK2 446 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 B4E1Z4 1266 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 RAD21O60216 631 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 NMT2O60551 498 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SNAI1O95863 264 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 TTLL1O95922 423 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 CYP21A2P08686 494 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 OAZ1P54368 228 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SMAD3P84022 425 aaKnown RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 TLE2Q04725 743 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SHHQ15465 462 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SNRNP48Q6IEG0 339 aaKnown RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 ANKRD33Q7Z3H0 272 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SH3RF1Q7Z6J0 888 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 KLHDC9Q8NEP7 349 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 ESR2Q92731 530 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 BADQ92934 168 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 TRIM43Q96BQ3 446 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 TOX2Q96NM4 488 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 IL17RBQ9NRM6 502 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 RIPK3Q9Y572 518 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 SPTBN5Q9NRC6 3674 aaKnown RBP11.13□□□□□ -0.63
COL6A2-207ENST00000460886 MCM3APO60318 1980 aa11.13□□□□□ -0.63
COL6A2-207ENST00000460886 KDM4AO75164 1064 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 PGK1P00558 417 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 CLTBP09497 229 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 FDX1P10109 184 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 ITGB8P26012 769 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 CST5P28325 142 aaPredicted RBP11.12□□□□□ -0.63
COL6A2-207ENST00000460886 NKX3-2P78367 333 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 C9orf50Q5SZB4 431 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 FERMT2Q96AC1 680 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 FGD4Q96M96 766 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 KRT23Q9C075 422 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 CNNM2Q9H8M5 875 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 FEM1BQ9UK73 627 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 TAF6LQ9Y6J9 622 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
COL6A2-207ENST00000460886 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 MOXD2PA6NHM9 499 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 E7EWF7 191 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 SLC27A2O14975 620 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
COL6A2-207ENST00000460886 REC8O95072 547 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 ACLYP53396 1101 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 TRDNQ13061 729 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 CREB3L3Q68CJ9 461 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-207ENST00000460886 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
COL6A2-207ENST00000460886 CHST13Q8NET6 341 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 ZKSCAN3Q9BRR0 538 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-207ENST00000460886 TCP11L1Q9NUJ3 509 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 ZSWIM5Q9P217 1185 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 FBXO40Q9UH90 709 aa11.11□□□□□ -0.63
COL6A2-207ENST00000460886 FAM184BQ9ULE4 1060 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms