RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 FLOT1O75955 427 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 FDX1P10109 184 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 GNA11P29992 359 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 HOXA7P31268 230 aaPredicted RBP12.53□□□□□ -0.4
CSDC2-202ENST00000460790 DSG3P32926 999 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 KRT2P35908 639 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 SNAP25P60880 206 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 TRAF1Q13077 416 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 FBXO11Q86XK2 927 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 DAGLBQ8NCG7 672 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 BRMS1Q9HCU9 246 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 ADAMTS5Q9UNA0 930 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 PCDHA1Q9Y5I3 950 aa12.53□□□□□ -0.4
CSDC2-202ENST00000460790 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
CSDC2-202ENST00000460790 M0R2N6 131 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 DNM1Q05193 864 aaKnown RBP12.52□□□□□ -0.41
CSDC2-202ENST00000460790 NR5A1Q13285 461 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 MOGSQ13724 837 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 GNL2Q13823 731 aaKnown RBP12.52□□□□□ -0.41
CSDC2-202ENST00000460790 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
CSDC2-202ENST00000460790 ATL3Q6DD88 541 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
CSDC2-202ENST00000460790 FASTKD5Q7L8L6 764 aaKnown RBP12.52□□□□□ -0.41
CSDC2-202ENST00000460790 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 BLIDQ8IZY5 108 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 WNK4Q96J92 1243 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 CHAMP1Q96JM3 812 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
CSDC2-202ENST00000460790 VWA5AO00534 786 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 ADAMTS3O15072 1205 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 TOMM70O94826 608 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 MCM4P33991 863 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 HUNKP57058 714 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 NFKBIBQ15653 356 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 TREML2Q5T2D2 321 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
CSDC2-202ENST00000460790 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 BICD2Q8TD16 824 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
CSDC2-202ENST00000460790 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 RIC8AQ9NPQ8 531 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 PNMA2Q9UL42 364 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 ZNF536O15090 1300 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
CSDC2-202ENST00000460790 ZBED4O75132 1171 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 ICAM1P05362 532 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
CSDC2-202ENST00000460790 GTF2A2P52657 109 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 MRPL12P52815 198 aaKnown RBP12.5□□□□□ -0.41
CSDC2-202ENST00000460790 KRT85P78386 507 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 USH1GQ495M9 461 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 CCDC174Q6PII3 467 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 REPS2Q8NFH8 660 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
CSDC2-202ENST00000460790 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
CSDC2-202ENST00000460790 SPDYE16A6NNV3 312 aaPredicted RBP12.49□□□□□ -0.41
CSDC2-202ENST00000460790 CETPP11597 493 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 YY1P25490 414 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 ADCY7P51828 1080 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 OAZ1P54368 228 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 EARS2Q5JPH6 523 aaKnown RBP12.49□□□□□ -0.41
CSDC2-202ENST00000460790 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 CUL5Q93034 780 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
CSDC2-202ENST00000460790 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 MRPL11Q9Y3B7 192 aaKnown RBP12.49□□□□□ -0.41
CSDC2-202ENST00000460790 CTDP1Q9Y5B0 961 aaPredicted RBP12.49□□□□□ -0.41
CSDC2-202ENST00000460790 MYH7BA7E2Y1 1941 aa12.49□□□□□ -0.41
CSDC2-202ENST00000460790 ABCB11O95342 1321 aa12.48□□□□□ -0.41
CSDC2-202ENST00000460790 GOLGA6L22H0YM25 854 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms