RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SMARCE1Q969G3 411 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 MAGEF1Q9HAY2 307 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 ATRNL1Q5VV63 1379 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 STXBP3O00186 592 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 ECE2O60344 883 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
ERCC3-205ENST00000460485 MMP14P50281 582 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 EVX2Q03828 476 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 DACT2Q5SW24 774 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
ERCC3-205ENST00000460485 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 SPATA20Q8TB22 786 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 AK8Q96MA6 479 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 RIOX1Q9H6W3 641 aa16.03■□□□□ 0.16
ERCC3-205ENST00000460485 M0R2N6 131 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 AP5Z1O43299 807 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.16
ERCC3-205ENST00000460485 ENTPD3O75355 529 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 SOX10P56693 466 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 MDM2Q00987 491 aaPredicted RBP16.02■□□□□ 0.16
ERCC3-205ENST00000460485 LONRF3Q496Y0 759 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 WWC2Q6AWC2 1192 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 MCTP2Q6DN12 878 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 APOBEC3HQ6NTF7 200 aaKnown RBP16.02■□□□□ 0.16
ERCC3-205ENST00000460485 CDC42EP5Q6NZY7 148 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 IQUBQ8NA54 791 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 GSDMAQ96QA5 445 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.16
ERCC3-205ENST00000460485 GLIS2Q9BZE0 524 aaPredicted RBP16.02■□□□□ 0.16
ERCC3-205ENST00000460485 CUEDC2Q9H467 287 aa16.02■□□□□ 0.16
ERCC3-205ENST00000460485 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
ERCC3-205ENST00000460485 ERCC5P28715 1186 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-205ENST00000460485 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
ERCC3-205ENST00000460485 NAPAP54920 295 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 PTGDRQ13258 359 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 PICALMQ13492 652 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 PIK3AP1Q6ZUJ8 805 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 HEATR3Q7Z4Q2 680 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 FOXP4Q8IVH2 680 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-205ENST00000460485 STAG2Q8N3U4 1231 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 ZNRF3Q9ULT6 936 aa16.01■□□□□ 0.15
ERCC3-205ENST00000460485 PDHBP11177 359 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 CXCL9Q07325 125 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 PNOCQ13519 176 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 NONOQ15233 471 aaKnown RBP eCLIP16■□□□□ 0.15
ERCC3-205ENST00000460485 DOK7Q18PE1 504 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 SH3RF1Q7Z6J0 888 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 CCDC150Q8NCX0 1101 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 DCAF4Q8WV16 495 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 CCDC102AQ96A19 550 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 ZIC5Q96T25 663 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 TRIM34Q9BYJ4 488 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 RMND1Q9NWS8 449 aa16■□□□□ 0.15
ERCC3-205ENST00000460485 PPIP5K2O43314 1243 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 CYTH3O43739 400 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 SHMT1P34896 483 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 HUNKP57058 714 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 MORC3Q14149 939 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 SYMPKQ92797 1274 aaKnown RBP15.99■□□□□ 0.15
ERCC3-205ENST00000460485 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
ERCC3-205ENST00000460485 TMOD2Q9NZR1 351 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 NYAP2Q9P242 653 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 SERTAD1Q9UHV2 236 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 PCDHA6Q9UN73 950 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 PCDHA8Q9Y5H6 950 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
ERCC3-205ENST00000460485 hCG_1642624A0A1W2PR95 340 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 FAM155AB1AL88 458 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-205ENST00000460485 F8W031 263 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-205ENST00000460485 SLC26A4O43511 780 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 TPM2P07951 284 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 ATP2B1P20020 1258 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 KCNJ6P48051 423 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 HIRAP54198 1017 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-205ENST00000460485 ZNF543Q08ER8 600 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 TRAF1Q13077 416 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 ZNF174Q15697 407 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 RGMBQ6NW40 437 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 DTHD1Q6ZMT9 781 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 CTU1Q7Z7A3 348 aaKnown RBP15.98■□□□□ 0.15
ERCC3-205ENST00000460485 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
ERCC3-205ENST00000460485 KIAA1524Q8TCG1 905 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
ERCC3-205ENST00000460485 MKL1Q969V6 931 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 ZNF408Q9H9D4 720 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 KANSL2Q9H9L4 492 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 DBNDD1Q9H9R9 158 aa15.98■□□□□ 0.15
ERCC3-205ENST00000460485 PNMA6FA0A0J9YX94 578 aa15.97■□□□□ 0.15
ERCC3-205ENST00000460485 FAM205CA6NFA0 338 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms