RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 SLC16A2P36021 539 aa27.84■■■□□ 2.05
HOXB3-202ENST00000460160 CCDC174Q6PII3 467 aa27.84■■■□□ 2.05
HOXB3-202ENST00000460160 CENPQQ7L2Z9 268 aaPredicted RBP27.84■■■□□ 2.05
HOXB3-202ENST00000460160 IQCA1Q86XH1 822 aa27.84■■■□□ 2.05
HOXB3-202ENST00000460160 DGKHQ86XP1 1220 aa27.84■■■□□ 2.05
HOXB3-202ENST00000460160 SNHG28P0DPA3 235 aa27.83■■■□□ 2.05
HOXB3-202ENST00000460160 ANKRD35Q8N283 1001 aa27.83■■■□□ 2.05
HOXB3-202ENST00000460160 KRT23Q9C075 422 aa27.83■■■□□ 2.05
HOXB3-202ENST00000460160 GPCPD1Q9NPB8 672 aa27.83■■■□□ 2.05
HOXB3-202ENST00000460160 ZSWIM5Q9P217 1185 aa27.83■■■□□ 2.05
HOXB3-202ENST00000460160 NRBP1Q9UHY1 535 aa27.83■■■□□ 2.05
HOXB3-202ENST00000460160 EVI5O60447 810 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ZNF543Q08ER8 600 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 CCDC178Q5BJE1 867 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 SYDE2Q5VT97 1194 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 SKAP1Q86WV1 359 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 RANBP17Q9H2T7 1088 aaKnown RBP27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ACAD9Q9H845 621 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 CNNM2Q9H8M5 875 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 RNF146Q9NTX7 359 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 NR2E3Q9Y5X4 410 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 TKFCQ3LXA3 575 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ANO1Q5XXA6 986 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ENAHQ8N8S7 591 aaPredicted RBP27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ANKS1AQ92625 1134 aa27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ZSCAN10Q96SZ4 725 aaPredicted RBP27.82■■■□□ 2.04
HOXB3-202ENST00000460160 ALAS1P13196 640 aa27.81■■■□□ 2.04
HOXB3-202ENST00000460160 TAL1P17542 331 aaPredicted RBP27.81■■■□□ 2.04
HOXB3-202ENST00000460160 MSL3Q8N5Y2 521 aaKnown RBP27.81■■■□□ 2.04
HOXB3-202ENST00000460160 FGD4Q96M96 766 aa27.81■■■□□ 2.04
HOXB3-202ENST00000460160 TRERF1Q96PN7 1200 aa27.81■■■□□ 2.04
HOXB3-202ENST00000460160 MAMDC4Q6UXC1 1216 aa27.8■■■□□ 2.04
HOXB3-202ENST00000460160 ZNF467Q7Z7K2 595 aaPredicted RBP27.8■■■□□ 2.04
HOXB3-202ENST00000460160 PNMA1Q8ND90 353 aa27.8■■■□□ 2.04
HOXB3-202ENST00000460160 A1CFQ9NQ94 594 aaKnown RBP27.8■■■□□ 2.04
HOXB3-202ENST00000460160 SYNGAP1Q96PV0 1343 aa27.8■■■□□ 2.04
HOXB3-202ENST00000460160 ICAM1P05362 532 aa27.79■■■□□ 2.04
HOXB3-202ENST00000460160 CYP21A2P08686 494 aa27.79■■■□□ 2.04
HOXB3-202ENST00000460160 CCPG1Q9ULG6 757 aa27.79■■■□□ 2.04
HOXB3-202ENST00000460160 U3KPZ7 1027 aaPredicted RBP27.79■■■□□ 2.04
HOXB3-202ENST00000460160 TNKSO95271 1327 aa27.79■■■□□ 2.04
HOXB3-202ENST00000460160 SNAI1O95863 264 aaPredicted RBP27.78■■■□□ 2.04
HOXB3-202ENST00000460160 ZNF865P0CJ78 1059 aaPredicted RBP27.78■■■□□ 2.04
HOXB3-202ENST00000460160 MUM1L1Q5H9M0 696 aa27.78■■■□□ 2.04
HOXB3-202ENST00000460160 LCTP09848 1927 aa27.78■■■□□ 2.04
HOXB3-202ENST00000460160 DNM1LO00429 736 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 KAT14Q9H8E8 782 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 CNPY2Q9Y2B0 182 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 TAF6LQ9Y6J9 622 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 GOLGA8HP0CJ92 632 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 CNTN2Q02246 1040 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 GPATCH4Q5T3I0 446 aaKnown RBP27.77■■■□□ 2.04
HOXB3-202ENST00000460160 CYB5R4Q7L1T6 521 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 FAM133AQ8N9E0 248 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 UBAC1Q9BSL1 405 aa27.77■■■□□ 2.04
HOXB3-202ENST00000460160 GJC2Q5T442 439 aaPredicted RBP27.76■■■□□ 2.03
HOXB3-202ENST00000460160 C7orf61Q8IZ16 206 aa27.76■■■□□ 2.03
HOXB3-202ENST00000460160 ARRDC4Q8NCT1 418 aa27.76■■■□□ 2.03
HOXB3-202ENST00000460160 MAP4K1Q92918 833 aa27.76■■■□□ 2.03
HOXB3-202ENST00000460160 COLQQ9Y215 455 aaPredicted RBP27.76■■■□□ 2.03
HOXB3-202ENST00000460160 POTEB2H3BUK9 544 aa27.75■■■□□ 2.03
HOXB3-202ENST00000460160 LRRC26Q2I0M4 334 aa27.74■■■□□ 2.03
HOXB3-202ENST00000460160 BMP2KLQ5H9B9 411 aa27.74■■■□□ 2.03
HOXB3-202ENST00000460160 HABP4Q5JVS0 413 aaKnown RBP27.74■■■□□ 2.03
HOXB3-202ENST00000460160 SENP6Q9GZR1 1112 aaPredicted RBP27.74■■■□□ 2.03
HOXB3-202ENST00000460160 CPVLQ9H3G5 476 aa27.74■■■□□ 2.03
HOXB3-202ENST00000460160 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.74■■■□□ 2.03
HOXB3-202ENST00000460160 CYP39A1Q9NYL5 469 aa27.74■■■□□ 2.03
HOXB3-202ENST00000460160 LAMA3Q16787 3333 aa27.74■■■□□ 2.03
HOXB3-202ENST00000460160 MYH6P13533 1939 aa27.74■■■□□ 2.03
HOXB3-202ENST00000460160 RARBP10826 455 aa27.73■■■□□ 2.03
HOXB3-202ENST00000460160 AKR1A1P14550 325 aa27.73■■■□□ 2.03
HOXB3-202ENST00000460160 TRDNQ13061 729 aa27.73■■■□□ 2.03
HOXB3-202ENST00000460160 SEC23AQ15436 765 aa27.73■■■□□ 2.03
HOXB3-202ENST00000460160 ARMCX2Q7L311 632 aa27.73■■■□□ 2.03
HOXB3-202ENST00000460160 LENG1Q96BZ8 264 aaPredicted RBP27.73■■■□□ 2.03
HOXB3-202ENST00000460160 RBM8AQ9Y5S9 174 aaKnown RBP27.73■■■□□ 2.03
HOXB3-202ENST00000460160 SOWAHBA6NEL2 793 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 LRRC41Q15345 812 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 IFIT1BQ5T764 474 aaKnown RBP27.72■■■□□ 2.03
HOXB3-202ENST00000460160 CHRDL2Q6WN34 429 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 STOX1Q6ZVD7 989 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 CCDC144CPQ8IYA2 1237 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 ESYT1Q9BSJ8 1104 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 XPNPEP3Q9NQH7 507 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 ZHX1Q9UKY1 873 aaPredicted RBP27.72■■■□□ 2.03
HOXB3-202ENST00000460160 KBTBD13C9JR72 458 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 E7EWF7 191 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 ASTN1O14525 1302 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 NSMFQ6X4W1 530 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 UBA5Q9GZZ9 404 aa27.72■■■□□ 2.03
HOXB3-202ENST00000460160 LSG1Q9H089 658 aaKnown RBP27.72■■■□□ 2.03
HOXB3-202ENST00000460160 WDR19Q8NEZ3 1342 aa27.71■■■□□ 2.03
HOXB3-202ENST00000460160 NFIBO00712 420 aa27.71■■■□□ 2.03
HOXB3-202ENST00000460160 MYCNP04198 464 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-202ENST00000460160 ACVR2BQ13705 512 aa27.71■■■□□ 2.03
HOXB3-202ENST00000460160 ASPRV1Q53RT3 343 aa27.71■■■□□ 2.03
HOXB3-202ENST00000460160 ABHD16BQ9H3Z7 469 aa27.71■■■□□ 2.03
HOXB3-202ENST00000460160 LRRC37A2A6NM11 1700 aa27.7■■■□□ 2.03
HOXB3-202ENST00000460160 KIAA1211Q6ZU35 1233 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms