RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ZKSCAN3Q9BRR0 538 aa18.94■□□□□ 0.62
COL7A1-203ENST00000459756 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
COL7A1-203ENST00000459756 HOMER2Q9NSB8 354 aa18.94■□□□□ 0.62
COL7A1-203ENST00000459756 SGSM2O43147 1006 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 SNHG28P0DPA3 235 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 COL6A1P12109 1028 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 ZNF543Q08ER8 600 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 SYDE2Q5VT97 1194 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 TTBK2Q6IQ55 1244 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 CCDC174Q6PII3 467 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 MAMDC4Q6UXC1 1216 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 ZSCAN10Q96SZ4 725 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-203ENST00000459756 GPCPD1Q9NPB8 672 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 RNF146Q9NTX7 359 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 ZSWIM5Q9P217 1185 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 CNPY2Q9Y2B0 182 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-203ENST00000459756 FRMPD2Q68DX3 1309 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-203ENST00000459756 SYNGAP1Q96PV0 1343 aa18.93■□□□□ 0.62
COL7A1-203ENST00000459756 ICAM1P05362 532 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 NEFLP07196 543 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 ALAS1P13196 640 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 SLC16A2P36021 539 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 ARRDC4Q8NCT1 418 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 TRERF1Q96PN7 1200 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 UBAC1Q9BSL1 405 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 RANBP17Q9H2T7 1088 aaKnown RBP18.92■□□□□ 0.62
COL7A1-203ENST00000459756 PFASO15067 1338 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 ALPK3Q96L96 1907 aa18.92■□□□□ 0.62
COL7A1-203ENST00000459756 DNM1LO00429 736 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 SNAP25P60880 206 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 PTH1RQ03431 593 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
COL7A1-203ENST00000459756 ENAHQ8N8S7 591 aaPredicted RBP18.91■□□□□ 0.62
COL7A1-203ENST00000459756 PNMA1Q8ND90 353 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 KAT14Q9H8E8 782 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 PNMA2Q9UL42 364 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 CCPG1Q9ULG6 757 aa18.91■□□□□ 0.62
COL7A1-203ENST00000459756 DNAH12Q6ZR08 3092 aa18.9■□□□□ 0.62
COL7A1-203ENST00000459756 TRDNQ13061 729 aa18.9■□□□□ 0.62
COL7A1-203ENST00000459756 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
COL7A1-203ENST00000459756 TNKSO95271 1327 aa18.9■□□□□ 0.62
COL7A1-203ENST00000459756 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 SNAI1O95863 264 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-203ENST00000459756 CYP21A2P08686 494 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 ZNF865P0CJ78 1059 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-203ENST00000459756 RARBP10826 455 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-203ENST00000459756 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 MAP4K1Q92918 833 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 FGD4Q96M96 766 aa18.89■□□□□ 0.61
COL7A1-203ENST00000459756 KBTBD13C9JR72 458 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 AKR1A1P14550 325 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 KIAA1211Q6ZU35 1233 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 C7orf61Q8IZ16 206 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
COL7A1-203ENST00000459756 GOLGA8HP0CJ92 632 aa18.87■□□□□ 0.61
COL7A1-203ENST00000459756 CNTN2Q02246 1040 aa18.87■□□□□ 0.61
COL7A1-203ENST00000459756 ASPRV1Q53RT3 343 aa18.87■□□□□ 0.61
COL7A1-203ENST00000459756 HABP4Q5JVS0 413 aaKnown RBP18.87■□□□□ 0.61
COL7A1-203ENST00000459756 GJC2Q5T442 439 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-203ENST00000459756 IFIT1BQ5T764 474 aaKnown RBP18.87■□□□□ 0.61
COL7A1-203ENST00000459756 SENP6Q9GZR1 1112 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-203ENST00000459756 ABHD16BQ9H3Z7 469 aa18.87■□□□□ 0.61
COL7A1-203ENST00000459756 XPNPEP3Q9NQH7 507 aa18.87■□□□□ 0.61
COL7A1-203ENST00000459756 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-203ENST00000459756 CYP39A1Q9NYL5 469 aa18.87■□□□□ 0.61
COL7A1-203ENST00000459756 COLQQ9Y215 455 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-203ENST00000459756 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
COL7A1-203ENST00000459756 LRRC41Q15345 812 aa18.86■□□□□ 0.61
COL7A1-203ENST00000459756 CYB5R4Q7L1T6 521 aa18.86■□□□□ 0.61
COL7A1-203ENST00000459756 ARMCX2Q7L311 632 aa18.86■□□□□ 0.61
COL7A1-203ENST00000459756 RALYLQ86SE5 291 aaKnown RBP18.86■□□□□ 0.61
COL7A1-203ENST00000459756 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-203ENST00000459756 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
COL7A1-203ENST00000459756 RBM8AQ9Y5S9 174 aaKnown RBP18.86■□□□□ 0.61
COL7A1-203ENST00000459756 MCM3APO60318 1980 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 ASB14A6NK59 587 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 E7EWF7 191 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 MYCNP04198 464 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-203ENST00000459756 PARP1P09874 1014 aaKnown RBP18.85■□□□□ 0.61
COL7A1-203ENST00000459756 ACVR2BQ13705 512 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 SEC23AQ15436 765 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 LRRC26Q2I0M4 334 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 CHRDL2Q6WN34 429 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 CCDC144CPQ8IYA2 1237 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 ESYT1Q9BSJ8 1104 aa18.85■□□□□ 0.61
COL7A1-203ENST00000459756 RANBP2P49792 3224 aaKnown RBP18.85■□□□□ 0.61
COL7A1-203ENST00000459756 RNF180Q86T96 592 aa18.84■□□□□ 0.61
COL7A1-203ENST00000459756 SKAP1Q86WV1 359 aa18.84■□□□□ 0.61
COL7A1-203ENST00000459756 UBA5Q9GZZ9 404 aa18.84■□□□□ 0.61
COL7A1-203ENST00000459756 ERICH2A1L162 156 aa18.83■□□□□ 0.6
COL7A1-203ENST00000459756 NFIBO00712 420 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms