RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 CDH23Q9H251 3354 aa6.9□□□□□ -1.31
VPS8-214ENST00000458721 PLXNA1Q9UIW2 1896 aa6.9□□□□□ -1.31
VPS8-214ENST00000458721 KBTBD13C9JR72 458 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 GDF11O95390 407 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 GH2P01242 217 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 CYP2E1P05181 493 aaPredicted RBP6.89□□□□□ -1.31
VPS8-214ENST00000458721 RARSP54136 660 aaKnown RBP6.89□□□□□ -1.31
VPS8-214ENST00000458721 ATP2B2Q01814 1243 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 CCL14Q16627 93 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 TNNI3KQ59H18 835 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 TTC39AQ5SRH9 613 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 CATSPERGQ6ZRH7 1159 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 TBC1D9Q6ZT07 1266 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 TTC6Q86TZ1 520 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 MAPKAPK5Q8IW41 473 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 CABP5Q9NP86 173 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 GMPR2Q9P2T1 348 aaKnown RBP6.89□□□□□ -1.31
VPS8-214ENST00000458721 PALD1Q9ULE6 856 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 FPGT-TNNI3KV9GXZ4 949 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 PRUNE2Q8WUY3 3088 aa6.89□□□□□ -1.31
VPS8-214ENST00000458721 MYH7P12883 1935 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 COL11A1P12107 1806 aaPredicted RBP6.88□□□□□ -1.31
VPS8-214ENST00000458721 SEPT4O43236 478 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 CNMDO75829 334 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 TRIM27P14373 513 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 RTP1P59025 263 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 QPCTQ16769 361 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 CERKLQ49MI3 558 aaPredicted RBP6.88□□□□□ -1.31
VPS8-214ENST00000458721 ADGRA1Q86SQ6 560 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 SSH3Q8TE77 659 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 SENP6Q9GZR1 1112 aaPredicted RBP6.88□□□□□ -1.31
VPS8-214ENST00000458721 MROH8Q9H579 483 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 SH2D4AQ9H788 454 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
VPS8-214ENST00000458721 EYSQ5T1H1 3165 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 PNMA6EA0A0J9YXQ4 647 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 LILRB3O75022 631 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 F12P00748 615 aaPredicted RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 ADORA2AP29274 412 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 COPB2P35606 906 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 USP5P45974 858 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 CLK2P49760 499 aaKnown RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 JAG1P78504 1218 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 MAP3K12Q12852 859 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 TTF1Q15361 905 aaPredicted RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 ABCB5Q2M3G0 1257 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 WDR78Q5VTH9 848 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 TSC1Q92574 1164 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 SPATC1LQ9H0A9 340 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 RPAP3Q9H6T3 665 aaPredicted RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 HOXC10Q9NYD6 342 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 FLRT1Q9NZU1 646 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 SWAP70Q9UH65 585 aa6.87□□□□□ -1.31
VPS8-214ENST00000458721 NOP58Q9Y2X3 529 aaKnown RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 GREB1LQ9C091 1923 aaPredicted RBP6.87□□□□□ -1.31
VPS8-214ENST00000458721 MUC3AQ02505 3323 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 ZNFX1Q9P2E3 1918 aaKnown RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 IDH1O75874 414 aaKnown RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 SLC25A27O95847 323 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 CYP7A1P22680 504 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 CNGA1P29973 690 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 CYP2C19P33261 490 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 SHMT1P34896 483 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 GABPAQ06546 454 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 OS9Q13438 667 aaPredicted RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 COG2Q14746 738 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 SLC39A5Q6ZMH5 540 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 TMEM179Q6ZVK1 233 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 DPP9Q86TI2 863 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 ERC1Q8IUD2 1116 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 MSL3Q8N5Y2 521 aaKnown RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 CDX2Q99626 313 aaPredicted RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 DBNDD2Q9BQY9 259 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 SENP2Q9HC62 589 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 BTBD7Q9P203 1132 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 MAP10Q9P2G4 905 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 DBNLQ9UJU6 430 aaKnown RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 PHF24Q9UPV7 400 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 DIS3Q9Y2L1 958 aaKnown RBP6.86□□□□□ -1.31
VPS8-214ENST00000458721 TACC3Q9Y6A5 838 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 NCOR1O75376 2440 aa6.86□□□□□ -1.31
VPS8-214ENST00000458721 MROH7Q68CQ1 1323 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 WDR46O15213 610 aaKnown RBP6.85□□□□□ -1.31
VPS8-214ENST00000458721 PEX10O60683 326 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 CLTBP09497 229 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 RARBP10826 455 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 ZAP70P43403 619 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 LRRC41Q15345 812 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 ZYXQ15942 572 aaKnown RBP6.85□□□□□ -1.31
VPS8-214ENST00000458721 SHROOM1Q2M3G4 852 aaPredicted RBP6.85□□□□□ -1.31
VPS8-214ENST00000458721 CCDC174Q6PII3 467 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 RNF180Q86T96 592 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 TRPV1Q8NER1 839 aa6.85□□□□□ -1.31
VPS8-214ENST00000458721 NPLOC4Q8TAT6 608 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms