RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 NOM1Q5C9Z4 860 aaKnown RBP12.32□□□□□ -0.44
RFX3-211ENST00000458034 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 SOGA3Q5TF21 947 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 CYP26C1Q6V0L0 522 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 RASGRP2Q7LDG7 609 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
RFX3-211ENST00000458034 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 RPGRQ92834 1020 aaKnown RBP12.32□□□□□ -0.44
RFX3-211ENST00000458034 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
RFX3-211ENST00000458034 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.44
RFX3-211ENST00000458034 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 THAP9Q9H5L6 903 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 MYO1AQ9UBC5 1043 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 ADGRG1Q9Y653 693 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 M0R2N6 131 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 KIF20AO95235 890 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 PARP1P09874 1014 aaKnown RBP12.31□□□□□ -0.44
RFX3-211ENST00000458034 CASP1P29466 404 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
RFX3-211ENST00000458034 IL17AQ16552 155 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 PTPN21Q16825 1174 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
RFX3-211ENST00000458034 SMYD4Q8IYR2 804 aaPredicted RBP12.31□□□□□ -0.44
RFX3-211ENST00000458034 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 RRP36Q96EU6 259 aaKnown RBP12.31□□□□□ -0.44
RFX3-211ENST00000458034 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
RFX3-211ENST00000458034 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
RFX3-211ENST00000458034 A0A1W2PQC6 194 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 OR52Z1P0C646 297 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 RASA1P20936 1047 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 CASP14P31944 242 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 CCT6AP40227 531 aaKnown RBP12.3□□□□□ -0.44
RFX3-211ENST00000458034 NAPAP54920 295 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 ST5P78524 1137 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 AMPD3Q01432 767 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 NONOQ15233 471 aaKnown RBP eCLIP12.3□□□□□ -0.44
RFX3-211ENST00000458034 RAD9BQ6WBX8 426 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 TXNRD3Q86VQ6 643 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 TEX11Q8IYF3 940 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 STAG2Q8N3U4 1231 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 NEDD1Q8NHV4 660 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 CPLX3Q8WVH0 158 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 STAMQ92783 540 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 DHTKD1Q96HY7 919 aaPredicted RBP12.3□□□□□ -0.44
RFX3-211ENST00000458034 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
RFX3-211ENST00000458034 EYA3Q99504 573 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 NUP88Q99567 741 aaPredicted RBP12.3□□□□□ -0.44
RFX3-211ENST00000458034 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
RFX3-211ENST00000458034 TAB2Q9NYJ8 693 aa12.3□□□□□ -0.44
RFX3-211ENST00000458034 LRRC37AA6NMS7 1700 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 GPR75-ASB3A0A0A6YYF3 556 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 ESYT2A0FGR8 921 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 GYPCP04921 128 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 BTDP43251 543 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 KCNQ4P56696 695 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 INF2Q27J81 1249 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 TEX35Q5T0J7 233 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 CABP7Q86V35 215 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 IQCDQ96DY2 449 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 WDR24Q96S15 920 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 NUP58Q9BVL2 599 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 ZMYND12Q9H0C1 365 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 VPS16Q9H269 839 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 MRPL44Q9H9J2 332 aaKnown RBP12.29□□□□□ -0.44
RFX3-211ENST00000458034 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 GGA1Q9UJY5 639 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 JAG2Q9Y219 1238 aa12.29□□□□□ -0.44
RFX3-211ENST00000458034 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms