RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 TACC3Q9Y6A5 838 aa18.67■□□□□ 0.58
CHCHD3-204ENST00000457942 MKL1Q969V6 931 aa18.66■□□□□ 0.58
CHCHD3-204ENST00000457942 TINF2Q9BSI4 451 aa18.66■□□□□ 0.58
CHCHD3-204ENST00000457942 RWDD1Q9H446 243 aaPredicted RBP18.66■□□□□ 0.58
CHCHD3-204ENST00000457942 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
CHCHD3-204ENST00000457942 HELLSQ9NRZ9 838 aa18.66■□□□□ 0.58
CHCHD3-204ENST00000457942 CNPY2Q9Y2B0 182 aa18.66■□□□□ 0.58
CHCHD3-204ENST00000457942 TMEM265A0A087WTH1 108 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 RANBP6O60518 1105 aaKnown RBP18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 AAMPQ13685 434 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 ZNF792Q3KQV3 632 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 VPS53Q5VIR6 699 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 RNF180Q86T96 592 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 RILPL2Q969X0 211 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 TIFAQ96CG3 184 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 ZNF576Q9H609 170 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 NRBP1Q9UHY1 535 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
CHCHD3-204ENST00000457942 CHD9Q3L8U1 2897 aa18.64■□□□□ 0.58
CHCHD3-204ENST00000457942 SMCHD1A6NHR9 2005 aa18.64■□□□□ 0.58
CHCHD3-204ENST00000457942 A0A0D9SFI3 127 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 GRXCR1A8MXD5 290 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 PBX2P40425 430 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 SLC1A4P43007 532 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 STAT2P52630 851 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 C1orf53Q5VUE5 145 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 ANKRD35Q8N283 1001 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 FAM227BQ96M60 508 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 SLC38A10Q9HBR0 1119 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 HOMER2Q9NSB8 354 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 RIPK3Q9Y572 518 aa18.64■□□□□ 0.57
CHCHD3-204ENST00000457942 KIAA0355O15063 1070 aa18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 FOXP2O15409 715 aa18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 MCMDC2Q4G0Z9 681 aa18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 PRDM12Q9H4Q4 367 aa18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 INCENPQ9NQS7 918 aa18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 FBXO40Q9UH90 709 aa18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 ZHX1Q9UKY1 873 aaPredicted RBP18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHCHD3-204ENST00000457942 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 NMT2O60551 498 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 AKR1A1P14550 325 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 MCCP23508 829 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 FAAP100Q0VG06 881 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 NMIQ13287 307 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 CCDC85BQ15834 202 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 FAM160B2Q86V87 743 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 CHURC1Q8WUH1 139 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 GAS2L1Q99501 681 aaPredicted RBP18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 STARD7Q9NQZ5 370 aa18.62■□□□□ 0.57
CHCHD3-204ENST00000457942 SYNRGQ9UMZ2 1314 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 FDX1P10109 184 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 OAZ1P54368 228 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 IRX5P78411 483 aaPredicted RBP18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 KCTD1Q719H9 257 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 CHST13Q8NET6 341 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 GMCL1Q96IK5 515 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 ANAPC4Q9UJX5 808 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 MCM3APO60318 1980 aa18.61■□□□□ 0.57
CHCHD3-204ENST00000457942 CCDC171Q6TFL3 1326 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 SYNGAP1Q96PV0 1343 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 MYADML2A6NDP7 307 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 ACLYP53396 1101 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 CHD1LQ86WJ1 897 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 SMC5Q8IY18 1101 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 MSL3Q8N5Y2 521 aaKnown RBP18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 EXOC6Q8TAG9 804 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 STAG1Q8WVM7 1258 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 PPP1R12CQ9BZL4 782 aa18.6■□□□□ 0.57
CHCHD3-204ENST00000457942 DCDC2CA8MYV0 355 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ORC4O43929 436 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ADAMTS4O75173 837 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 FGAP02671 866 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ZNF865P0CJ78 1059 aaPredicted RBP18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ACRP10323 421 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 MFAP1P55081 439 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 HAND2P61296 217 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ALX1Q15699 326 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 CCDC174Q6PII3 467 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ADAMTS19Q8TE59 1207 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 PBX4Q9BYU1 374 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 ACAD9Q9H845 621 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 IL17RBQ9NRM6 502 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 RNF146Q9NTX7 359 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 THEGQ9P2T0 379 aa18.59■□□□□ 0.57
CHCHD3-204ENST00000457942 HSPD1P10809 573 aaKnown RBP18.58■□□□□ 0.56
CHCHD3-204ENST00000457942 IGFBP4P22692 258 aa18.58■□□□□ 0.56
CHCHD3-204ENST00000457942 RCSD1Q6JBY9 416 aa18.58■□□□□ 0.56
CHCHD3-204ENST00000457942 RASGRP2Q7LDG7 609 aa18.58■□□□□ 0.56
CHCHD3-204ENST00000457942 DIAPH3Q9NSV4 1193 aa18.58■□□□□ 0.56
CHCHD3-204ENST00000457942 FAM184BQ9ULE4 1060 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms