RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 UBE3CQ15386 1083 aa17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 KCNA10Q16322 511 aa17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 SNRNP48Q6IEG0 339 aaKnown RBP17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 CTR9Q6PD62 1173 aa17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 CCDC174Q6PII3 467 aa17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 KLHDC9Q8NEP7 349 aa17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 ZNF576Q9H609 170 aa17.21■□□□□ 0.35
UPF3AP2-201ENST00000457924 C2orf72A6NCS6 295 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 ATP5JP18859 108 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 MAMDC4Q6UXC1 1216 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 TIFAQ96CG3 184 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 HAUS7Q99871 368 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 CTDP1Q9Y5B0 961 aaPredicted RBP17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 ELP1O95163 1332 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
UPF3AP2-201ENST00000457924 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 MS4A1P11836 297 aa17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 PPIGQ13427 754 aaKnown RBP eCLIP17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 TJAP1Q5JTD0 557 aa17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 CCSAPQ6IQ19 270 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 MFSD5Q6N075 450 aa17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 VTI1AQ96AJ9 217 aa17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 SPC25Q9HBM1 224 aa17.19■□□□□ 0.34
UPF3AP2-201ENST00000457924 GREB1LQ9C091 1923 aaPredicted RBP17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 DNAJC25-GNG10A0A024R161 153 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 CHGBP05060 677 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 C6orf222P0C671 652 aaPredicted RBP17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 CST5P28325 142 aaPredicted RBP17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 CCDC129Q6ZRS4 1044 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 CPXCR1Q8N123 301 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 PRPF38AQ8NAV1 312 aaKnown RBP17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 USP38Q8NB14 1042 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 TBX21Q9UL17 535 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 RIPK3Q9Y572 518 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 PRUNE2Q8WUY3 3088 aa17.18■□□□□ 0.34
UPF3AP2-201ENST00000457924 MYADML2A6NDP7 307 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 F5H6K3 240 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 ZBED4O75132 1171 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 ASGR1P07306 291 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 PDE4AP27815 886 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 KLRC3Q07444 240 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 TMEM199Q8N511 208 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 TMC2Q8TDI7 906 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 GAS2L1Q99501 681 aaPredicted RBP17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 ABHD16BQ9H3Z7 469 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 NYAP2Q9P242 653 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 MCM3APO60318 1980 aa17.17■□□□□ 0.34
UPF3AP2-201ENST00000457924 SPTBN5Q9NRC6 3674 aaKnown RBP17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 MYH4Q9Y623 1939 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 ATP2A1O14983 1001 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 NDUFB10O96000 172 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 CDK7P50613 346 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 ANKRD35Q8N283 1001 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
UPF3AP2-201ENST00000457924 ARVCFO00192 962 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 TLR3O15455 904 aaKnown RBP17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 CSF2RAP15509 400 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 RASA1P20936 1047 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 GJA9P57773 515 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 CCDC144BQ3MJ40 725 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 GNASQ5JWF2 1037 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 TMEM240Q5SV17 173 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 PSRC1Q6PGN9 363 aaPredicted RBP17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 C16orf59Q7L2K0 433 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 PBX4Q9BYU1 374 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 RAVER2Q9HCJ3 691 aaKnown RBP17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 CLIP2Q9UDT6 1046 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 FBXO40Q9UH90 709 aa17.15■□□□□ 0.34
UPF3AP2-201ENST00000457924 MYO9BQ13459 2157 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 GRXCR1A8MXD5 290 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 PBX2P40425 430 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 ARMCX2Q7L311 632 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 PPP1R12CQ9BZL4 782 aa17.14■□□□□ 0.33
UPF3AP2-201ENST00000457924 FEM1BQ9UK73 627 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms