RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 SYAP1Q96A49 352 aaPredicted RBP10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 WRNIP1Q96S55 665 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 FEZ1Q99689 392 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 ZMYND12Q9H0C1 365 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 C6orf50Q9HD87 102 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 VPS54Q9P1Q0 977 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 RCOR1Q9UKL0 485 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 NOL7Q9UMY1 257 aaKnown RBP10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 PCDHA4Q9UN74 947 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 CEP131Q9UPN4 1083 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 CNPY2Q9Y2B0 182 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 SSC5DA1L4H1 1573 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 C19orf81C9J6K1 198 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 PRPF40AO75400 957 aaKnown RBP10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 SLURP2P0DP57 97 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 IREB2P48200 963 aaKnown RBP10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 FOSBP53539 338 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 NAPAP54920 295 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 JAG1P78504 1218 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 ORC2Q13416 577 aaPredicted RBP10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 SYDE2Q5VT97 1194 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 ADGRF4Q8IZF3 695 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 BLIDQ8IZY5 108 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 LEO1Q8WVC0 666 aaPredicted RBP10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 C12orf42Q96LP6 360 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 JMJD4Q9H9V9 463 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 FEM1BQ9UK73 627 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 MTMR7Q9Y216 660 aa10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
CDC42EP3-204ENST00000457889 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 GOLGA6L4A6NEF3 574 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 BTBD18B2RXH4 712 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 KIF28PB7ZC32 967 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 RIOK3O14730 519 aaKnown RBP10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 DTNBO60941 627 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 PTPRAP18433 802 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 NPY5RQ15761 445 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 MAP3K11Q16584 847 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 SHROOM1Q2M3G4 852 aaPredicted RBP10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 KCTD1Q719H9 257 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 KRT25Q7Z3Z0 450 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 ZNF280CQ8ND82 737 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 ACER1Q8TDN7 264 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 PIGSQ96S52 555 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 UBA5Q9GZZ9 404 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 GJB4Q9NTQ9 266 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 ISY1Q9ULR0 285 aaKnown RBP10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 CSADQ9Y600 493 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 TCHHQ07283 1943 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 SRCAPQ6ZRS2 3230 aa10.22□□□□□ -0.77
CDC42EP3-204ENST00000457889 A0A1W2PQ27 194 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 A0A1W2PQ64 194 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 A0A1W2PQD8 194 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 hCG_1642624A0A1W2PR95 340 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 TMEM232C9JQI7 657 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 UBE2Q2LH0YL09 131 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 RAD21O60216 631 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 PPP6R2O75170 966 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 VEGFAP15692 232 aaPredicted RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 INPP5BP32019 993 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 ECE1P42892 770 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 ADCY7P51828 1080 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 MRPL12P52815 198 aaKnown RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 BACE1P56817 501 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 FKBP1BP68106 108 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 MAP3K9P80192 1104 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 IKQ13123 557 aaPredicted RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 SLC39A14Q15043 492 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 STK38Q15208 465 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 CDC37Q16543 378 aaPredicted RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 FOXD4L6Q3SYB3 417 aaPredicted RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 FOXD4L3Q6VB84 417 aaPredicted RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 HOMER1Q86YM7 354 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 REXO1Q8N1G1 1221 aaKnown RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 LINC00301Q8NCQ3 95 aa10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.77
CDC42EP3-204ENST00000457889 PAPPA2Q9BXP8 1791 aa10.21□□□□□ -0.78
CDC42EP3-204ENST00000457889 CCDC194A0A1B0GVG4 234 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 SMCO2A6NFE2 343 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 M0R2N6 131 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 SPTLC2O15270 562 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP2O75604 605 aaPredicted RBP10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 NR5A1Q13285 461 aa10.2□□□□□ -0.78
CDC42EP3-204ENST00000457889 QRICH1Q2TAL8 776 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms