RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 HNRNPH1P31943 449 aaKnown RBP15.25■□□□□ 0.03
TOP3B-213ENST00000457179 AFMP43652 599 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 SEC23AQ15436 765 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 SLC27A3Q5K4L6 730 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 ZNF569Q5MCW4 686 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 BAZ2AQ9UIF9 1905 aaKnown RBP15.25■□□□□ 0.03
TOP3B-213ENST00000457179 SEMA3EO15041 775 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 GSCP56915 257 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-213ENST00000457179 SRBD1Q8N5C6 995 aaKnown RBP15.25■□□□□ 0.03
TOP3B-213ENST00000457179 ATP8A2Q9NTI2 1148 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 SOWAHDA6NJG2 315 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 RXRBP28702 533 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 TROAPQ12815 778 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 PNMA1Q8ND90 353 aa15.25■□□□□ 0.03
TOP3B-213ENST00000457179 HNRNPLLQ8WVV9 542 aaKnown RBP15.25■□□□□ 0.03
TOP3B-213ENST00000457179 PPP6R2O75170 966 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 BBOX1O75936 387 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 CPP00450 1065 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 NLGN1Q8N2Q7 840 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 CPLX3Q8WVH0 158 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-213ENST00000457179 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
TOP3B-213ENST00000457179 ADAMTS3O15072 1205 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 HEATR3Q7Z4Q2 680 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 CEP112Q8N8E3 955 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 UBA5Q9GZZ9 404 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 HPSEQ9Y251 543 aa15.24■□□□□ 0.03
TOP3B-213ENST00000457179 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
TOP3B-213ENST00000457179 XBP1P17861 261 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 BMP6P22004 513 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 ATP2B4P23634 1241 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 STX17P56962 302 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 EZH2Q15910 746 aaKnown RBP15.23■□□□□ 0.03
TOP3B-213ENST00000457179 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 CNPY4Q8N129 248 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 WASF1Q92558 559 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-213ENST00000457179 WNT7AO00755 349 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 KIF5CO60282 957 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 MCM7P33993 719 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 DEFB132Q7Z7B7 95 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 EHD4Q9H223 541 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 IL17RBQ9NRM6 502 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 CDC23Q9UJX2 597 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 IKBKBO14920 756 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 LDHCP07864 332 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 C12orf60Q5U649 245 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 LRRC47Q8N1G4 583 aaKnown RBP15.23■□□□□ 0.03
TOP3B-213ENST00000457179 TC2NQ8N9U0 490 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 PLIN2Q99541 437 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 CSRNP2Q9H175 543 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
TOP3B-213ENST00000457179 CCDC175P0C221 793 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 TTC19Q6DKK2 380 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-213ENST00000457179 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 EPSTI1Q96J88 318 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 RAB21Q9UL25 225 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 FRMPD2Q68DX3 1309 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-213ENST00000457179 H0YHG0 523 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 STX10O60499 249 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 CRY2Q49AN0 593 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 SMYD4Q8IYR2 804 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-213ENST00000457179 IGSF22Q8N9C0 903 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 NOA1Q8NC60 698 aaKnown RBP15.22■□□□□ 0.03
TOP3B-213ENST00000457179 EYA3Q99504 573 aa15.22■□□□□ 0.03
TOP3B-213ENST00000457179 MYH7P12883 1935 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 SRGNP10124 158 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 SCP2P22307 547 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.03
TOP3B-213ENST00000457179 POSTNQ15063 836 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 MYH2Q9UKX2 1941 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 CTAGE15A4D2H0 777 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 EBAG9O00559 213 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 CTAGE8P0CG41 777 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 GSTO1P78417 241 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 CTAGE6Q86UF2 777 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 CTAGE4Q8IX94 777 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 MSANTD4Q8NCY6 345 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 MED4Q9NPJ6 270 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 TUBE1Q9UJT0 475 aa15.21■□□□□ 0.03
TOP3B-213ENST00000457179 MYH15Q9Y2K3 1946 aa15.21■□□□□ 0.02
TOP3B-213ENST00000457179 RTFDC1Q9BY42 306 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-213ENST00000457179 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 USP40Q9NVE5 1235 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 FBXO2Q9UK22 296 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-213ENST00000457179 MAN1B1Q9UKM7 699 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 SAMM50Q9Y512 469 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-213ENST00000457179 PKN1Q16512 942 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 GBP6Q6ZN66 633 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms