RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 CDK5RAP2Q96SN8 1893 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 ELP1O95163 1332 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 DNAJC25-GNG10A0A024R161 153 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 TRIM43BA6NCK2 446 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 PLA2G6O60733 806 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 RRP1P56182 461 aaKnown RBP10.42□□□□□ -0.74
PKP4-207ENST00000457109 SMAD3P84022 425 aaKnown RBP10.42□□□□□ -0.74
PKP4-207ENST00000457109 TNFAIP2Q03169 654 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 RRP12Q5JTH9 1297 aaKnown RBP10.42□□□□□ -0.74
PKP4-207ENST00000457109 KCTD1Q719H9 257 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 ARMCX2Q7L311 632 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 SH3RF1Q7Z6J0 888 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 TICAM2Q86XR7 235 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 TRIM43Q96BQ3 446 aaPredicted RBP10.42□□□□□ -0.74
PKP4-207ENST00000457109 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
PKP4-207ENST00000457109 MPHOSPH6Q99547 160 aaKnown RBP10.42□□□□□ -0.74
PKP4-207ENST00000457109 RNF146Q9NTX7 359 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
PKP4-207ENST00000457109 SYNRGQ9UMZ2 1314 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 A0A0U1RQG5 324 aaPredicted RBP10.41□□□□□ -0.74
PKP4-207ENST00000457109 KIAA0355O15063 1070 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 ADAMTS4O75173 837 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 CABYRO75952 493 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 ASGR1P07306 291 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 AAMPQ13685 434 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 MCMDC2Q4G0Z9 681 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 NSMFQ6X4W1 530 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 CCDC129Q6ZRS4 1044 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 ANKRD33Q7Z3H0 272 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 CCDC144CPQ8IYA2 1237 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 TMEM199Q8N511 208 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
PKP4-207ENST00000457109 RILPL2Q969X0 211 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 AGBL1Q96MI9 1066 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
PKP4-207ENST00000457109 ADD3Q9UEY8 706 aaKnown RBP10.41□□□□□ -0.74
PKP4-207ENST00000457109 CCPG1Q9ULG6 757 aa10.41□□□□□ -0.74
PKP4-207ENST00000457109 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 B4DLN1 442 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 ARVCFO00192 962 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 TIMP1P01033 207 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 CST5P28325 142 aaPredicted RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 MRPL12P52815 198 aaKnown RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 GJA9P57773 515 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 CNTN2Q02246 1040 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 FAAP100Q0VG06 881 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 PPIGQ13427 754 aaKnown RBP eCLIP10.4□□□□□ -0.745e-7■□□□□ 8.2
PKP4-207ENST00000457109 ALX1Q15699 326 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 BRDTQ58F21 947 aaPredicted RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 C9orf50Q5SZB4 431 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 MFSD6Q6ZSS7 791 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.743e-7■■■■□ 25.5
PKP4-207ENST00000457109 KLHDC9Q8NEP7 349 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 DCAF4Q8WV16 495 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 LENG1Q96BZ8 264 aaPredicted RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 SEZ6LQ9BYH1 1024 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 MTIF3Q9H2K0 278 aaKnown RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 SEMA6BQ9H3T3 888 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
PKP4-207ENST00000457109 ANAPC4Q9UJX5 808 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 PRR12Q9ULL5 1215 aa10.4□□□□□ -0.74
PKP4-207ENST00000457109 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 DYNC1LI2O43237 492 aaPredicted RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 ORC4O43929 436 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 FGAP02671 866 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 TOP1P11387 765 aaKnown RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 PDE1AP54750 535 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 MFSD5Q6N075 450 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 TTC14Q96N46 770 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 CRBNQ96SW2 442 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 RNF41Q9H4P4 317 aaPredicted RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 A1CFQ9NQ94 594 aaKnown RBP10.39□□□□□ -0.75
PKP4-207ENST00000457109 INCENPQ9NQS7 918 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
PKP4-207ENST00000457109 PTPDC1A2A3K4 754 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 ZNF213O14771 459 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 NMT2O60551 498 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 ICAM1P05362 532 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 SNAP25P60880 206 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 FSCN1Q16658 493 aaKnown RBP10.38□□□□□ -0.75
PKP4-207ENST00000457109 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 EEPD1Q7L9B9 569 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 FAM133AQ8N9E0 248 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 ESR2Q92731 530 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 CDX2Q99626 313 aaPredicted RBP10.38□□□□□ -0.75
PKP4-207ENST00000457109 UPF3AQ9H1J1 476 aaKnown RBP10.38□□□□□ -0.75
PKP4-207ENST00000457109 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 IL17RBQ9NRM6 502 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 TCP11L1Q9NUJ3 509 aa10.38□□□□□ -0.75
PKP4-207ENST00000457109 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.751e-6■■■■□ 23.2
PKP4-207ENST00000457109 ZNF236Q9UL36 1845 aa10.37□□□□□ -0.75
PKP4-207ENST00000457109 TMEM265A0A087WTH1 108 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms