RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 KAT14Q9H8E8 782 aa19.05■□□□□ 0.64
CPSF6-203ENST00000456847 ZNF536O15090 1300 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 SGSM2O43147 1006 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 SEPT4O43236 478 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 MNX1P50219 401 aaPredicted RBP19.04■□□□□ 0.64
CPSF6-203ENST00000456847 PTH1RQ03431 593 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 TKFCQ3LXA3 575 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 DGKHQ86XP1 1220 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 ZSCAN10Q96SZ4 725 aaPredicted RBP19.04■□□□□ 0.64
CPSF6-203ENST00000456847 UBAC1Q9BSL1 405 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 CCPG1Q9ULG6 757 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
CPSF6-203ENST00000456847 TNKSO95271 1327 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 TRDNQ13061 729 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 TRERF1Q96PN7 1200 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 ZSWIM5Q9P217 1185 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 NRBP1Q9UHY1 535 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 CNPY2Q9Y2B0 182 aa19.04■□□□□ 0.64
CPSF6-203ENST00000456847 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
CPSF6-203ENST00000456847 ZNF543Q08ER8 600 aa19.03■□□□□ 0.64
CPSF6-203ENST00000456847 BTNL9Q6UXG8 535 aa19.03■□□□□ 0.64
CPSF6-203ENST00000456847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
CPSF6-203ENST00000456847 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
CPSF6-203ENST00000456847 RANBP17Q9H2T7 1088 aaKnown RBP19.03■□□□□ 0.64
CPSF6-203ENST00000456847 MCM3APO60318 1980 aa19.03■□□□□ 0.64
CPSF6-203ENST00000456847 DNAJC25-GNG10A0A024R161 153 aa19.02■□□□□ 0.64
CPSF6-203ENST00000456847 KIAA1211Q6ZU35 1233 aa19.02■□□□□ 0.63
CPSF6-203ENST00000456847 SKAP1Q86WV1 359 aa19.02■□□□□ 0.63
CPSF6-203ENST00000456847 C7orf61Q8IZ16 206 aa19.02■□□□□ 0.63
CPSF6-203ENST00000456847 MSL3Q8N5Y2 521 aaKnown RBP19.02■□□□□ 0.63
CPSF6-203ENST00000456847 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.63
CPSF6-203ENST00000456847 PFASO15067 1338 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 SYNGAP1Q96PV0 1343 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 POTEB2H3BUK9 544 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 ICAM1P05362 532 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 NEFLP07196 543 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 CYP21A2P08686 494 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
CPSF6-203ENST00000456847 GPATCH4Q5T3I0 446 aaKnown RBP19.01■□□□□ 0.63
CPSF6-203ENST00000456847 RALYLQ86SE5 291 aaKnown RBP19.01■□□□□ 0.63
CPSF6-203ENST00000456847 CCDC136Q96JN2 1154 aa19.01■□□□□ 0.63
CPSF6-203ENST00000456847 A1CFQ9NQ94 594 aaKnown RBP19.01■□□□□ 0.63
CPSF6-203ENST00000456847 ZHX1Q9UKY1 873 aaPredicted RBP19.01■□□□□ 0.63
CPSF6-203ENST00000456847 KBTBD13C9JR72 458 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 DNM1LO00429 736 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 GOLGA8HP0CJ92 632 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 SNHG28P0DPA3 235 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 GJC2Q5T442 439 aaPredicted RBP19■□□□□ 0.63
CPSF6-203ENST00000456847 IFIT1BQ5T764 474 aaKnown RBP19■□□□□ 0.63
CPSF6-203ENST00000456847 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
CPSF6-203ENST00000456847 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 SMCHD1A6NHR9 2005 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 RARBP10826 455 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 MUM1L1Q5H9M0 696 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 NSMFQ6X4W1 530 aa19■□□□□ 0.63
CPSF6-203ENST00000456847 MYH6P13533 1939 aa18.99■□□□□ 0.63
CPSF6-203ENST00000456847 COL6A1P12109 1028 aa18.99■□□□□ 0.63
CPSF6-203ENST00000456847 AKR1A1P14550 325 aa18.99■□□□□ 0.63
CPSF6-203ENST00000456847 CYB5R4Q7L1T6 521 aa18.99■□□□□ 0.63
CPSF6-203ENST00000456847 ANKS1AQ92625 1134 aa18.99■□□□□ 0.63
CPSF6-203ENST00000456847 SENP6Q9GZR1 1112 aaPredicted RBP18.99■□□□□ 0.63
CPSF6-203ENST00000456847 RBM8AQ9Y5S9 174 aaKnown RBP18.99■□□□□ 0.63
CPSF6-203ENST00000456847 ZNF865P0CJ78 1059 aaPredicted RBP18.98■□□□□ 0.63
CPSF6-203ENST00000456847 CNTN2Q02246 1040 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 ASPRV1Q53RT3 343 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 BMP2KLQ5H9B9 411 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 MAMDC4Q6UXC1 1216 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 XPNPEP3Q9NQH7 507 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.98■□□□□ 0.63
CPSF6-203ENST00000456847 PNMA2Q9UL42 364 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 LCTP09848 1927 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 DHX16O60231 1041 aaKnown RBP18.98■□□□□ 0.63
CPSF6-203ENST00000456847 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 ARMCX2Q7L311 632 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 NCOA7Q8NI08 942 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 FGD4Q96M96 766 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 LRRC37A2A6NM11 1700 aa18.98■□□□□ 0.63
CPSF6-203ENST00000456847 ERICH2A1L162 156 aa18.97■□□□□ 0.63
CPSF6-203ENST00000456847 E7EWF7 191 aa18.97■□□□□ 0.63
CPSF6-203ENST00000456847 SNAI1O95863 264 aaPredicted RBP18.97■□□□□ 0.63
CPSF6-203ENST00000456847 PARP1P09874 1014 aaKnown RBP18.97■□□□□ 0.63
CPSF6-203ENST00000456847 FAM133AQ8N9E0 248 aa18.97■□□□□ 0.63
CPSF6-203ENST00000456847 MAP4K1Q92918 833 aa18.97■□□□□ 0.63
CPSF6-203ENST00000456847 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
CPSF6-203ENST00000456847 FAM184BQ9ULE4 1060 aa18.97■□□□□ 0.63
CPSF6-203ENST00000456847 CCDC144CPQ8IYA2 1237 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 LENG1Q96BZ8 264 aaPredicted RBP18.96■□□□□ 0.63
CPSF6-203ENST00000456847 CYP39A1Q9NYL5 469 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 ZMYND8Q9ULU4 1186 aaPredicted RBP18.96■□□□□ 0.63
CPSF6-203ENST00000456847 COLQQ9Y215 455 aaPredicted RBP18.96■□□□□ 0.63
CPSF6-203ENST00000456847 IFIT3O14879 490 aaKnown RBP18.96■□□□□ 0.63
CPSF6-203ENST00000456847 ACVR2BQ13705 512 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 SART3Q15020 963 aaKnown RBP18.96■□□□□ 0.63
CPSF6-203ENST00000456847 LRRC41Q15345 812 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 LRRC26Q2I0M4 334 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 ABHD16BQ9H3Z7 469 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 ANO2Q9NQ90 1003 aa18.96■□□□□ 0.63
CPSF6-203ENST00000456847 TAF6LQ9Y6J9 622 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms