RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 CNTN2Q02246 1040 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 SH3RF1Q7Z6J0 888 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 MSL3Q8N5Y2 521 aaKnown RBP25.75■■□□□ 1.71
SEC22C-213ENST00000456222 CHST13Q8NET6 341 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 RILPL2Q969X0 211 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 ZHX1Q9UKY1 873 aaPredicted RBP25.75■■□□□ 1.71
SEC22C-213ENST00000456222 LCTP09848 1927 aa25.75■■□□□ 1.71
SEC22C-213ENST00000456222 SYNRGQ9UMZ2 1314 aa25.74■■□□□ 1.71
SEC22C-213ENST00000456222 IKQ13123 557 aaPredicted RBP25.74■■□□□ 1.71
SEC22C-213ENST00000456222 RRP12Q5JTH9 1297 aaKnown RBP25.74■■□□□ 1.71
SEC22C-213ENST00000456222 RCSD1Q6JBY9 416 aa25.74■■□□□ 1.71
SEC22C-213ENST00000456222 ZNF467Q7Z7K2 595 aaPredicted RBP25.74■■□□□ 1.71
SEC22C-213ENST00000456222 FAM160B2Q86V87 743 aa25.74■■□□□ 1.71
SEC22C-213ENST00000456222 CHD1LQ86WJ1 897 aa25.74■■□□□ 1.71
SEC22C-213ENST00000456222 CHURC1Q8WUH1 139 aa25.74■■□□□ 1.71
SEC22C-213ENST00000456222 RWDD1Q9H446 243 aaPredicted RBP25.74■■□□□ 1.71
SEC22C-213ENST00000456222 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.74■■□□□ 1.71
SEC22C-213ENST00000456222 PRR12Q9ULL5 1215 aa25.74■■□□□ 1.71
SEC22C-213ENST00000456222 CCDC171Q6TFL3 1326 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 MYADML2A6NDP7 307 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 NUCB1Q02818 461 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 AAMPQ13685 434 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 CCDC174Q6PII3 467 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 Q7L0L9 218 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 LBHD1Q9BQE6 289 aaPredicted RBP25.73■■□□□ 1.71
SEC22C-213ENST00000456222 A1CFQ9NQ94 594 aaKnown RBP25.73■■□□□ 1.71
SEC22C-213ENST00000456222 PRDM5Q9NQX1 630 aaPredicted RBP25.73■■□□□ 1.71
SEC22C-213ENST00000456222 PDLIM7Q9NR12 457 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 TOMM22Q9NS69 142 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 RNF146Q9NTX7 359 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 FBXO40Q9UH90 709 aa25.73■■□□□ 1.71
SEC22C-213ENST00000456222 DDX49Q9Y6V7 483 aaKnown RBP25.73■■□□□ 1.71
SEC22C-213ENST00000456222 TRIM43BA6NCK2 446 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 PLA2G6O60733 806 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 TLE2Q04725 743 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 TTBK2Q6IQ55 1244 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 RNF180Q86T96 592 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 TBC1D10CQ8IV04 446 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 FAM133AQ8N9E0 248 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 TRIM43Q96BQ3 446 aaPredicted RBP25.72■■□□□ 1.71
SEC22C-213ENST00000456222 KATNBL1Q9H079 304 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 ACAD9Q9H845 621 aa25.72■■□□□ 1.71
SEC22C-213ENST00000456222 ASTN1O14525 1302 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 A0A1W2PQ45 241 aaPredicted RBP25.71■■□□□ 1.71
SEC22C-213ENST00000456222 A0A1W2PQY0 241 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 FDX1P10109 184 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 SDSP20132 328 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 ACVR2BQ13705 512 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 MUM1L1Q5H9M0 696 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 C1orf53Q5VUE5 145 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 ARMCX2Q7L311 632 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 FAM184BQ9ULE4 1060 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 LRRC37A2A6NM11 1700 aa25.71■■□□□ 1.71
SEC22C-213ENST00000456222 ZMYM6O95789 1325 aa25.7■■□□□ 1.71
SEC22C-213ENST00000456222 SOWAHBA6NEL2 793 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 ALAS1P13196 640 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 SLC16A2P36021 539 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 PPP4R3BQ5MIZ7 849 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 CCSAPQ6IQ19 270 aaPredicted RBP25.7■■□□□ 1.7
SEC22C-213ENST00000456222 TICAM2Q86XR7 235 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 CCDC144CPQ8IYA2 1237 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 KLHDC9Q8NEP7 349 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 TMEM47Q9BQJ4 181 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 OSBPL3Q9H4L5 887 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 PRKAG2Q9UGJ0 569 aa25.7■■□□□ 1.7
SEC22C-213ENST00000456222 ITGB8P26012 769 aa25.69■■□□□ 1.7
SEC22C-213ENST00000456222 CCDC96Q2M329 555 aa25.69■■□□□ 1.7
SEC22C-213ENST00000456222 CCDC144BQ3MJ40 725 aa25.69■■□□□ 1.7
SEC22C-213ENST00000456222 BADQ92934 168 aa25.69■■□□□ 1.7
SEC22C-213ENST00000456222 TRERF1Q96PN7 1200 aa25.69■■□□□ 1.7
SEC22C-213ENST00000456222 LAMA4Q16363 1823 aa25.69■■□□□ 1.7
SEC22C-213ENST00000456222 POTEB2H3BUK9 544 aa25.68■■□□□ 1.7
SEC22C-213ENST00000456222 DUSP11O75319 330 aaKnown RBP25.68■■□□□ 1.7
SEC22C-213ENST00000456222 ACLYP53396 1101 aa25.68■■□□□ 1.7
SEC22C-213ENST00000456222 DEFB123Q8N688 67 aa25.68■■□□□ 1.7
SEC22C-213ENST00000456222 DCAF4Q8WV16 495 aa25.68■■□□□ 1.7
SEC22C-213ENST00000456222 PURBQ96QR8 312 aaKnown RBP25.68■■□□□ 1.7
SEC22C-213ENST00000456222 ABHD16BQ9H3Z7 469 aa25.68■■□□□ 1.7
SEC22C-213ENST00000456222 EYSQ5T1H1 3165 aa25.68■■□□□ 1.7
SEC22C-213ENST00000456222 FRMPD2Q68DX3 1309 aaPredicted RBP25.67■■□□□ 1.7
SEC22C-213ENST00000456222 TOP1P11387 765 aaKnown RBP25.67■■□□□ 1.7
SEC22C-213ENST00000456222 PTGS1P23219 599 aa25.67■■□□□ 1.7
SEC22C-213ENST00000456222 KCNA10Q16322 511 aa25.67■■□□□ 1.7
SEC22C-213ENST00000456222 C9orf50Q5SZB4 431 aa25.67■■□□□ 1.7
SEC22C-213ENST00000456222 GPR153Q6NV75 609 aa25.67■■□□□ 1.7
SEC22C-213ENST00000456222 TCP11L1Q9NUJ3 509 aa25.67■■□□□ 1.7
SEC22C-213ENST00000456222 NEDD4P46934 1319 aa25.66■■□□□ 1.7
SEC22C-213ENST00000456222 PQBP1O60828 265 aaKnown RBP25.66■■□□□ 1.7
SEC22C-213ENST00000456222 TKFCQ3LXA3 575 aa25.66■■□□□ 1.7
SEC22C-213ENST00000456222 AKNAD1Q5T1N1 836 aa25.66■■□□□ 1.7
SEC22C-213ENST00000456222 TSEN34Q9BSV6 310 aaKnown RBP25.66■■□□□ 1.7
SEC22C-213ENST00000456222 RANBP17Q9H2T7 1088 aaKnown RBP25.66■■□□□ 1.7
SEC22C-213ENST00000456222 GPCPD1Q9NPB8 672 aa25.66■■□□□ 1.7
SEC22C-213ENST00000456222 CDH23Q9H251 3354 aa25.65■■□□□ 1.7
SEC22C-213ENST00000456222 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.65■■□□□ 1.7
SEC22C-213ENST00000456222 CTAGE5O15320 804 aa25.65■■□□□ 1.7
SEC22C-213ENST00000456222 SHHQ15465 462 aa25.65■■□□□ 1.7
SEC22C-213ENST00000456222 CWC27Q6UX04 472 aaKnown RBP25.65■■□□□ 1.7
SEC22C-213ENST00000456222 BTNL9Q6UXG8 535 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms