RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 UPF3AQ9H1J1 476 aaKnown RBP11.7□□□□□ -0.54
NIPSNAP1-204ENST00000455496 PLXNA3P51805 1871 aa11.7□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 BAIAP3O94812 1187 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 HLA-DOAP06340 250 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 RFC2P35250 354 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 KCNJ6P48051 423 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 MAPK8IP2Q13387 824 aaPredicted RBP11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 PUM1Q14671 1186 aaKnown RBP eCLIP11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ST3GAL2Q16842 350 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TIGD5Q53EQ6 642 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ZKSCAN2Q63HK3 967 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 MRPL38Q96DV4 380 aaKnown RBP11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 NOL10Q9BSC4 688 aaKnown RBP11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 FTOQ9C0B1 505 aaKnown RBP eCLIP11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TANGO6Q9C0B7 1094 aa11.69□□□□□ -0.54
NIPSNAP1-204ENST00000455496 PDS5AQ29RF7 1337 aaKnown RBP11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 LCHNA4D1U4 455 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 EYA2O00167 538 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 NCK2O43639 380 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TRIM27P14373 513 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 SIGLEC14Q08ET2 396 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ACAP1Q15027 740 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 COL4A4P53420 1690 aaPredicted RBP11.68□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TNKSO95271 1327 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 STXBP3O00186 592 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 SNAI1O95863 264 aaPredicted RBP11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 PLCG2P16885 1265 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 DSG3P32926 999 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ACVR2BQ13705 512 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CXCL17Q6UXB2 119 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 FTSJ3Q8IY81 847 aaKnown RBP11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CRBNQ96SW2 442 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CLDND1Q9NY35 253 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 PALD1Q9ULE6 856 aa11.67□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ZEB2O60315 1214 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 NKX3-2P78367 333 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 MAMDC4Q6UXC1 1216 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ANKRD44Q8N8A2 993 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 SH3RF3Q8TEJ3 882 aaPredicted RBP11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ZNF384Q8TF68 577 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CLUAP1Q96AJ1 413 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 NSUN4Q96CB9 384 aaKnown RBP11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 RAD9AQ99638 391 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ABHD16BQ9H3Z7 469 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TNNQ9UQP3 1299 aa11.66□□□□□ -0.54
NIPSNAP1-204ENST00000455496 DMDP11532 3685 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 LINC01553A4QN01 128 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 MBTPS2O43462 519 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 FLOT1O75955 427 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 BAG3O95817 575 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 BEX3Q00994 111 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TCEAL5Q5H9L2 206 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 MAPKAPK5Q8IW41 473 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 RETREG2Q8NC44 543 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 TGFBRAP1Q8WUH2 860 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 ATG4CQ96DT6 458 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 KMT2EQ8IZD2 1858 aa11.65□□□□□ -0.54
NIPSNAP1-204ENST00000455496 GRIN2DO15399 1336 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 DNAH14Q0VDD8 3507 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 CTAGE5O15320 804 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 ADCY6O43306 1168 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 CYP2C9P11712 490 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 MS4A1P11836 297 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 COPB2P35606 906 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 TMEM132BQ14DG7 1078 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 ABCB5Q2M3G0 1257 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 TATDN1Q6P1N9 297 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 ASIC4Q96FT7 647 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 ALDH8A1Q9H2A2 487 aaPredicted RBP11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 NSUN3Q9H649 340 aaKnown RBP11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
NIPSNAP1-204ENST00000455496 SETXQ7Z333 2677 aaKnown RBP11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 FLT1P17948 1338 aa11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 SMAD4Q13485 552 aaKnown RBP11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 NOL8Q76FK4 1167 aaKnown RBP11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 ATG9AQ7Z3C6 839 aa11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 TMEM57Q8N5G2 664 aa11.63□□□□□ -0.55
NIPSNAP1-204ENST00000455496 DDX11Q96FC9 970 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms