RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 DHTKD1Q96HY7 919 aaPredicted RBP14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 FLT1P17948 1338 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 SOWAHDA6NJG2 315 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 N4BP3O15049 544 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 CASP14P31944 242 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 PRCPP42785 496 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 FXR1P51114 621 aaKnown RBP eCLIP14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 PPP2R3AQ06190 1150 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 NFIXQ14938 502 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 PTPN21Q16825 1174 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 CYP26C1Q6V0L0 522 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 PTF1AQ7RTS3 328 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 IRF2BP1Q8IU81 584 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 ZNF507Q8TCN5 953 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 GPKOWQ92917 476 aaPredicted RBP eCLIP14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 DYNLL2Q96FJ2 89 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 BLZF1Q9H2G9 400 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 ABHD10Q9NUJ1 306 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 GREB1LQ9C091 1923 aaPredicted RBP14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 LGALS16A8MUM7 142 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 GNA11P29992 359 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 CDK8P49336 464 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 KCNQ4P56696 695 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 STIM1Q13586 685 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 MTF1Q14872 753 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 KARSQ15046 597 aaKnown RBP14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 TRAPPC3LQ5T215 181 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 FOXR2Q6PJQ5 311 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 MSL3Q8N5Y2 521 aaKnown RBP14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 TBC1D22AQ8WUA7 517 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 TGFBRAP1Q8WUH2 860 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 DNAJC7Q99615 494 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 C7orf25Q9BPX7 421 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 TMEM60Q9H2L4 133 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 CD209Q9NNX6 404 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 ANKIB1Q9P2G1 1089 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 MYO3BQ8WXR4 1341 aa14.1□□□□□ -0.15
ECHDC1-209ENST00000454591 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 KLRF2D3W0D1 207 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 KIF5CO60282 957 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 PARP1P09874 1014 aaKnown RBP14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 PNMA6AP0CW24 399 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 HOXA10P31260 410 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 RFC4P35249 363 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 UBA7P41226 1012 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 RHBDL3P58872 404 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 TTI2Q6NXR4 508 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 CNNM4Q6P4Q7 775 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 RETREG2Q8NC44 543 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 RIOX1Q9H6W3 641 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 C6orf50Q9HD87 102 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 CDC23Q9UJX2 597 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 SUGT1Q9Y2Z0 365 aa14.09□□□□□ -0.15
ECHDC1-209ENST00000454591 KLRG2A4D1S0 409 aaPredicted RBP14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 PSMA7O14818 248 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 OR52Z1P0C646 297 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 BTDP43251 543 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 ERVK-24P63145 666 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 GRIK5Q16478 980 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 INF2Q27J81 1249 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 PRR5LQ6MZQ0 368 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 TMCO3Q6UWJ1 677 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 SRGAP1Q7Z6B7 1085 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 MB21D1Q8N884 522 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 CEP112Q8N8E3 955 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 STAMQ92783 540 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 GOLGA1Q92805 767 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 EYA3Q99504 573 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 DESI2Q9BSY9 194 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 GDAQ9Y2T3 454 aa14.08□□□□□ -0.16
ECHDC1-209ENST00000454591 BBOX1O75936 387 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 ABCB11O95342 1321 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 CCNE1P24864 410 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 DNM2P50570 870 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 GPSM2P81274 684 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 TERF2Q15554 542 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 DIXDC1Q155Q3 683 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 MEA1Q16626 185 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 FIGNQ5HY92 759 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 SPATA31A6Q5VVP1 1343 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 HEATR3Q7Z4Q2 680 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 HNRNPLLQ8WVV9 542 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 RRP36Q96EU6 259 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 CRAMP1Q96RY5 1269 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
ECHDC1-209ENST00000454591 CAPN11Q9UMQ6 739 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms